Gene Bcenmc03_6619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6619 
Symbol 
ID6125542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp681959 
End bp682525 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content64% 
IMG OID641647632 
ProductTetR family transcriptional regulator 
Protein accessionYP_001774229 
Protein GI170735115 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.634361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.119433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA AACCGACCGT CCGCGAACAG ATTCTCGACC ACGCGATCAC GTTGATGATG 
CAGCGCGGTT ACAACGGCTT CAGCTATCGA GACCTGTCCG ACCTGGTGGG CGTGAAGACG
TCGAGCATCC ACTACTACTT CCCGTCGAAG GACGATCTCG TGCTGGAAGC GGTGGCGGCG
TACAGCGACG AAGTCCTCGC GGCCATGCGG ACGATCGATC CGGCGTTGCC GGCCGACGTG
AAGCTGAGCC TGTACACGAA GATGTTCGGC CGCACGCTCG GCGACGGCAA CCTGATCTGC
CTGTGCGGGA TGCTCGCGGC CGATATCGAA ACGCTGCCGG AGAACGTGCG GCAGGCCGTG
CAGGCGTTCT TCACGGCCAA CGAGCGCTGG CTCGCGGAAT TGCTGAAGCA AGGCGCGAAG
GAAGGCACGC TGCAGTTCAG CGGCGAACCC GAAACCGCGG CGCGCACGTT GTACGCGGCG
TTTCAGGGCA GCGTGCTGGC CAGCCGGTTG TTTCACACGC GGGCGCGTCT CGAGGATGTC
GAGGCCGTCT GGAAAACGCG GTCCTGA
 
Protein sequence
METKPTVREQ ILDHAITLMM QRGYNGFSYR DLSDLVGVKT SSIHYYFPSK DDLVLEAVAA 
YSDEVLAAMR TIDPALPADV KLSLYTKMFG RTLGDGNLIC LCGMLAADIE TLPENVRQAV
QAFFTANERW LAELLKQGAK EGTLQFSGEP ETAARTLYAA FQGSVLASRL FHTRARLEDV
EAVWKTRS