Gene Bcenmc03_6598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6598 
Symbol 
ID6125521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp658508 
End bp659473 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content70% 
IMG OID641647611 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001774208 
Protein GI170735094 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.456488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACC AGATTTCGCC AACGGGCCGT TCCACTGTCC TCCTCATCGG CGCCTCCGGC 
CTGCTCGGCC GCGCGGTTGC CGCCTGCCTG GCTCGCGAAT CGTCGTTGAC GCTCCTCGCC
ACCATACGGA ACCCGCAAAG CGCCGGTACA AAACTGCTCG CATTGCCGCC GGAAAACATC
GCCGAGCTGG ACGTTCTCGA CCAGTCGTCC CTCGAGCGTA TTTTTGAAAC CCACCGACCG
GCAGCGGTGA TTCTCTGCGC CGCCGAGCGC CGCCCCGACG TCTGCGAACG CGACCCGGCC
GCGGCCCGCG CCATCAACGT CACCGCGCCC GCCCGCATCG GCGCGCTCGC CACGCGATAC
GGCGCATGGA CGCTCGGTAT CTCGACCGAC TACGTCTTCG ACGGCAAGGC CGCCCCCTAC
AGCGAAAACG CGACCCCGAA CCCGCTGAAC ATCTACGGCC GCACCAAGCT GGAAGGCGAG
GCCGCGCTGC TTGCCGCGTC GCCGCTGTCG TGCGTGCTGC GCCTGCCGTT GCTGTTCGGC
CCGATCGCCG ACTGGAGCGA ATCGGCCGTC ACGAGCCTCG TGCCGGCCGT CGTCGCGTCT
TCGCGGCCGG GCGCCGATGC GGTCGGCATG GACGCATGGG CGATCCGTTA CCCGACCTGG
ACGCCCGACG TCGCGCAGGT CATCCGCGAC CTGACGCTGT GCCATCTCGC GGGTGACTCC
GTCACGGGCA TCCGCCATTG GTCGGGCGAG GAGCCGATGA CGAAGTACGA CATCGCGCAG
CGAATTGCCG CCGCGCTCGG CATCGACGCG TCGCTCACGC CGATCACGCA GCCGACCGAC
GCGACGCCGC GCCCGTACGA CTGCCATCTG GATGCCGCGC GCGTGCGCGC GCTCGGGATC
GATTACGCGA CGCCGTTCGA TACGGCGCTG CGGACCGTGC TGCGCGACGC GCCGCGGGCG
CTGTAG
 
Protein sequence
MPNQISPTGR STVLLIGASG LLGRAVAACL ARESSLTLLA TIRNPQSAGT KLLALPPENI 
AELDVLDQSS LERIFETHRP AAVILCAAER RPDVCERDPA AARAINVTAP ARIGALATRY
GAWTLGISTD YVFDGKAAPY SENATPNPLN IYGRTKLEGE AALLAASPLS CVLRLPLLFG
PIADWSESAV TSLVPAVVAS SRPGADAVGM DAWAIRYPTW TPDVAQVIRD LTLCHLAGDS
VTGIRHWSGE EPMTKYDIAQ RIAAALGIDA SLTPITQPTD ATPRPYDCHL DAARVRALGI
DYATPFDTAL RTVLRDAPRA L