| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6557 |
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| Symbol | |
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| ID | 6125480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 610499 |
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| End bp | 613690 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641647570 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001774167 |
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| Protein GI | 170735053 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.169266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG GCCGCCTGTC CGTCCAGCAG CCGGTGCTCG CGATCGTCCT GTCGATCGTG
CTGACGATCG TCGGCGCGCT GGCCTATTTC TCGCTCGCGG TATCCGAGTA TCCGGACATC
GCGCCGCCGA CCGTGGTGAT CCAGGCGACC TATCCGGGCG CCTCCGCGGA AACGGTCTCG
CAAACGGTGT CGACGCCGAT CGAACTGGAA GTGAACGGCG TGGAAGACAT GCTGTACATG
TACAGCCAGG CGACGTCCGA CGGCAGCCTG AACATCACCG TGACGTTCAA GCCCGGCACC
GACGTCGACA AGGCGCAGGT GCTCGTGCAG AACCGCGTCG CGCTCGCGAC GCCGCGCCTG
CCCGAGCCCG TGCAGCGCAG CGGCGTGTCG GTACGCAAGT CGTCGCCGAC GCAGCTCGGC
ACGATCTTCC TGTACTCGCC GGACCAGCGC TACGATCCGC TGTACGTATC GAACTATGCG
ATCCGCAACG TCGCGGACGT GCTCAAGCGG ATCGAAGGCG TCGGCGACAT CAACGCGCTC
GGCGCGCGCG AATACTCGAT GCGCATCTGG CTCGACCCCG AGCGCGTCGC GTCGTTCGGC
CTGAGCCCGG CCGACCTGAT CGCCGCGGTA CGTTCGCAGA ACACGCAGCT CGCGGGCGGC
GTGGTCGCGC AGGCGCCGAT CACGAACCAG GCATTCCAGC CGAACCTGAT CTTCGAGGGG
CGGCTCAAGC GCCCCGAGGA TTTCAGCGAC ATCGTCGTCA AGCAGGGCAA GGACGGCAGG
CTCGTGCGGC TGAAGGACGT GGCTCGCGTC GAAGTCGGCG CGCTCGCGTA TGCGACCGAC
AGCTACATGC TGCGCCATCC GACGATCGCG CTGCAGGTGC TGCAGCAACC CGGCGCGAAC
GCGGTCGCGA CGATGGACGC GGTCGAGAAG AAGATGGCCG AGCTGTCCCG CGACTTCCCG
AACGGCATCG TCTACAACAT CGGCTACAAC CCGACCGCGT TCATCGGCGA CAGCATCCAC
GAACTCGTGA AGACGATCTA CGAAGCCGTC GTGCTCGTCG TGTTCGTCGT GCTGCTGTTC
CTGCAGGGCT GGCGGCCGTC GATCATCCCG ATCCTGTCGA TTCCGGTATC GCTCGTCGGC
ACGTTCGCGG CGATGGCCAT GCTCGGCTAC TCGATCAACA ACCTGACGCT GTTCGGCCTC
GTGCTCGCGG TGGGGATCGT CGTCGACAAC GCGATCGTCG TGGTCGAGAA CGTCGAGCGG
CACCTGGCAG CCGGCGCCGG GCCACGCGAC GCGACGCTGC TGACGATGAA GGAAGTCGGC
GGCGCGCTGT TCGCGATCAC GCTCGTGCTG TGCGCGGTGT TCGTGCCGAC CTCGTTCATT
CCCGGCATCT CGGGCCAGTT CTTCCGCCAG TTCGGCGTGA CGATCGCCGT GTCCACCGCG
ATCTCGTTCT TCACGTCGGT GACGCTCGCG CCCGCGCTGT CCGCGATGAT GCTGAAAGCG
CACGCCAGCG ACCATGACGC AGCCACGCCG ACATCGCGCA TGGCTGCGCC GTTCGCGCCG
GCGATGCGCG TCGCGCGGCG CTTCGCGAAC GCGTTCAACC GCCTGTTCCA GCGCCTGTCC
GATGCCTATG GCCGGCTGGT CCGGAAAATC GTCCGGATCA TCCCCGCGAT GGCCGCACTG
TACGTCGTAC TGATCGCCGC GACCGGCTAC CTGCTCGTAT CGAGCCCGAA GGGCTTCATT
CCCGCGCAGG ATCGCGGCTA CCTCGTCGTG CTCGTGCGGA TGCCCGACGG CGCGACGCTC
GAACGCACCA GCGCGGTCGC GCGCAAGATC GAGGACATCG CGCTGTCGGT GCCCGGCGTC
GCGCGCGTAC CGGTGTTCTC CGGCGTCAAC GCGGCGACCG GCACGAACTC GGCGAACAGC
GCCGGCCTGT TCCCGGTGTT CCAGCCCTGG CCGGAACGCA AGGCGCGCGG CCTGACGATC
GACACGATCG CCGCCGAGAT GCGCAAGCGG CTCGCGACCA TCACCGAAGC GTCGATCGTC
GTCGCGATGC CGCCGCCGGT GCAGGGGCTC GGCAGCACGG GCGGCTTCGC GATGCGGCTC
GAAGACCGCA ACGGCCTCGG CACCGCCGCG CTCGCGAAGG CCACGCAGGA TCTCGTCGCG
GCCGCGAACC GCACGCCCGG CATGGTCGGC GTCTACACGC CCTACTCCGC GACGAGCCCG
CAGGTGCACG TCGAACTCGA CCGCGAGAAG GCCGAGATGC TCGGCGTGCC GAGCCAGGCG
ATCAACGATG CGGTTGAGAC GTATTTCGGT TCGACCTATA TCAACGACTT CAACATCGTC
GGGCGCACCT ATCGCGTGAC CGCGCAGGCG GACTTGCCGT TCCGCGTCGG CGCGTCGGAT
CTCGCGCGGT TGAAGGTGCG CAACCGCGAC GGCGAGATGG TGCCGATCGG CAGCGTGACG
CGCATCGACG ACATGCTCGG CGTCGACCGC GCACCGCGCT ACAACCTGTA TCCGGCCACC
GAAATCAACG GCGATACCGC GCCGGGCCTC GGCTCGGGCT TCGCGATCAA GACGATGGAA
ACGCTCGCGA AGCAGGTCCT GCCGCCCGGC ATTTCGTTCG AGTGGACCGA TCTGTCGTAT
CAGCAGACCA CGGCCGGCAA CACGGGGCTG CTCGTGTTCC CGCTGTGCGT GCTGCTCGTC
TATCTGGTGC TCGCCGCGCA GTACGGCAGC TGGAGCCTGC CCGTCTCGAT CCTGCTGATC
GTGCCGATGT GCCTGCTGGC CGCCTCGCTC GGCGTGCGCG CGCTCGGCCA GGACGTGAAC
ATCCTCACGC AGATCGGCTT CATCGTGCTG GTCGGGCTCG CCGCGAAGAA CGCGATCCTG
ATCGTCGAGG TCGCCAGGCA GCTGGAGGCC GACGGCGCCG AGCTCGTCGA GGCCGTCGTC
GAGGCCTGCG TGCAGCGGCT GCGCCCGATC GTGATGACGT CGCTCGCGTT CATCCTCGGC
GTGCTGCCGC TCGTGATCTC CGAAGGCGCG GGTGCGGAAA TGCGCCAGGC CGTCGGCGCG
GCGGTGTTCT TCGGGATGAT CGGCGTGACA TTCTTCGGGC TGCTGTTCAC GCCCGTGTTC
TATGTGATGG TTCGCCGGCT CGCGATGCGC AAGACCGCTG TCGCAGCCGT CGCGACGGAG
GCTGTGCAAT GA
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| Protein sequence | MNLGRLSVQQ PVLAIVLSIV LTIVGALAYF SLAVSEYPDI APPTVVIQAT YPGASAETVS
QTVSTPIELE VNGVEDMLYM YSQATSDGSL NITVTFKPGT DVDKAQVLVQ NRVALATPRL
PEPVQRSGVS VRKSSPTQLG TIFLYSPDQR YDPLYVSNYA IRNVADVLKR IEGVGDINAL
GAREYSMRIW LDPERVASFG LSPADLIAAV RSQNTQLAGG VVAQAPITNQ AFQPNLIFEG
RLKRPEDFSD IVVKQGKDGR LVRLKDVARV EVGALAYATD SYMLRHPTIA LQVLQQPGAN
AVATMDAVEK KMAELSRDFP NGIVYNIGYN PTAFIGDSIH ELVKTIYEAV VLVVFVVLLF
LQGWRPSIIP ILSIPVSLVG TFAAMAMLGY SINNLTLFGL VLAVGIVVDN AIVVVENVER
HLAAGAGPRD ATLLTMKEVG GALFAITLVL CAVFVPTSFI PGISGQFFRQ FGVTIAVSTA
ISFFTSVTLA PALSAMMLKA HASDHDAATP TSRMAAPFAP AMRVARRFAN AFNRLFQRLS
DAYGRLVRKI VRIIPAMAAL YVVLIAATGY LLVSSPKGFI PAQDRGYLVV LVRMPDGATL
ERTSAVARKI EDIALSVPGV ARVPVFSGVN AATGTNSANS AGLFPVFQPW PERKARGLTI
DTIAAEMRKR LATITEASIV VAMPPPVQGL GSTGGFAMRL EDRNGLGTAA LAKATQDLVA
AANRTPGMVG VYTPYSATSP QVHVELDREK AEMLGVPSQA INDAVETYFG STYINDFNIV
GRTYRVTAQA DLPFRVGASD LARLKVRNRD GEMVPIGSVT RIDDMLGVDR APRYNLYPAT
EINGDTAPGL GSGFAIKTME TLAKQVLPPG ISFEWTDLSY QQTTAGNTGL LVFPLCVLLV
YLVLAAQYGS WSLPVSILLI VPMCLLAASL GVRALGQDVN ILTQIGFIVL VGLAAKNAIL
IVEVARQLEA DGAELVEAVV EACVQRLRPI VMTSLAFILG VLPLVISEGA GAEMRQAVGA
AVFFGMIGVT FFGLLFTPVF YVMVRRLAMR KTAVAAVATE AVQ
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