| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6464 |
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| Symbol | |
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| ID | 6125387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 504201 |
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| End bp | 507389 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641647477 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001774074 |
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| Protein GI | 170734960 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.118226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGT TCTTCATCAA GCGTCCCATT CTCGCGTGGG TCATGGCCAT CGTCATCATG
CTGGTGGGCG CGGCGGCGGT CACGAGTCTT CCCGTCGCGC AGTACCCCAC CATCGCGCCG
CCCTCGGTGC AGGTGACGGC CACTTACCCC GGCGCCTCCG CCGACACCGT CGCTGCAACC
GTGACCCAGG TGATCGAGCA GAAGCTGAGC GGCATCGACA ACGTGCTGTA CATGTCGTCC
ACGAGCAGTT CCGCCGGACA GGCCACCATC ACGCTGACGT TCAATCCCGG AACGAATCCC
GACATCGCAC AAGTACAGGT GCAGAACAAG GTGACGCAGG CCACGCCTAC CCTGCCCCAA
ACGGTGCAGG AGCAAGGTGT GCAGGTAGCG AAGGCGTCGA CGAGCTTCCT CATGATCGTC
GCGCTCTCGT CGCCGGGCGG CACCTGGAAT TCGGTGGATC TCGGCAACAT CATCGCGACC
CGGATCGAAG ATCCGCTCGC GCAGTTGAAC GGCGTGGGCG ACGTGACGCT GTTCGGCGCG
CAGCACGCCA TGCGCATCTG GCTCAACCCG GTGAAGCTGC ACAGCTTCGG ACTCACGCCC
TCCGACGTGA CCACGGCCAT CACGAACCAG AACGTCGAGC TTTCCACGGG GCAGGTCGGC
GGCTCGCCGG CAACGGATTC GCAGGCCATC AACGCGACCA TCCGCTCGTC GAGTCTGCTG
ACGACCGCCG ACCAGTTCGC CAGCATCCTG CTGCGCGTGA ACAGCGACGG CTCGCGCGTG
CTGCTGAAGG ACGTGGCGCG CGTCGAGGTG GGCGGCGACA GCTACGACAC CTCGTCGCGT
CTGAACGGCA AGCCGGCATC CGCGCTCGCC ATCAAGCTCG CCACCGGCGC CAACGCGCTG
GACGCAGCCG ACGCCGTGCG CGCGAAGCTC GCCGAGATCC AGCTGCAATT GCCGAAGGAC
GTCGCGATCA GTTATCCGTA CGACACCACG CCGTTCGTTC GCATCTCGAT CGAAGAGGTC
GTGAAGACGC TGTTCGAAGC GGTCGTACTG GTCTTCCTCG TGATGTACCT GTTCCTGCAG
AACGTGCGCG CCACGCTGAT TCCGACCATC GTGGTGCCCG TTGCGCTGCT CGGCACGTTC
GGTGTGATGT CGATGATCGG TTTTTCGATC AACGTACTAT CGATGTTCGC GATGGTGCTC
GCCATCGGCC TGCTCGTGGA CGACGCCATC GTGGTGGTGG AAAACGTCGA GCGCATCATG
AGCGAGGAGA AGCTCGGCCC GAAGGAAGCC ACGCACAAGG CGATGGGACA GATTACCGGC
GCCCTGGTCG GCGTGACCAC CGTGCTCACC GCCGTCTTCA TTCCGATGGC GTTCTTCGCG
GGCTCCACGG GCGCGATCTA CCGGCAGTTC TCCATCACCA TCGTCTCGGC GATGCTGCTG
TCGGTCATGC TCGCGCTTAC GCTCACGCCG GCGCTGTGCG CCACGCTGCT CAAGCGCGCC
GACGTGGAGC ACCACGAAAA GCGCGGCTTC TTCGGCTGGT TCAACCGGTG GTTCGCCAAG
AGCAATGCGG GCTACAGTTC CTCGCTCGCT CGCGTGGTCG CGCGACCCGC GCGTTACATG
CTTCTCTACG GCGCGATCGC CGGCGTCGTG GCGTTGCTCT ACGTCACGTT GCCCTCCTCG
TTCCTGCCTG ACGAAGACCA GGGCTACTTC ATCGTGTCGA TCAGCGCGCC CGCGGGCACG
CCGGCCTCGC GCACGCTGAA GACGGTGGAG GCCGTGGAGC AGTACGTGCT GAAAGACGAG
CCTGGCGTCA AGCAGGTCAT CGCCATCAAC GGCTTCAGCT TCAACGGCCA GGGGCAGAAC
AACGCCATCG CGTTCGTGAC GCTCAAGGAC TGGAGCCTGC GCGGTTCGCG CGACAGCGCG
TCGGCCATCA TCGCGCGCGC CAACCAGCAT TTCGCCGGCA ATCGCGACGC GCGCATCTTC
GTGCTGAATC CGCCCGCCAT TCAGGAACTG GGTACGCAAA GCGGCCTCGA CTTCGAGATA
GAAGACCGCG GCGGCGCAGG CCACGACAAG CTGCTCGCGG TGCGCAACCA GTTTCTCGGC
ATGGCGTCGA AGGAACCGAC GCTCGCGATG GTGCGCCCGT CCGGCCTTGA AGACACCCCG
CAGCTGCAGG TGGACATCGA CCGCGAAAAA GCCAACGCGC TGGGGCTTTC CATCTCCGAC
GTCAACGACA CGCTGCAGAC CGCGTTCGGT TCGTCCTACG TGAACAACTA CATCGACACG
GGGCGCGTGC AGAAAGTCTA TGTGCAGTCG GACGCGCCGT ATCGCATGAT GCCTGCCGAC
CTCGGCGACT GGTATGTGAA GGCAGGCAGC AGTTCGTCGT CCTCGTCGTC CTCGAGCACC
ACCACGAGCA CGACAGGCTA CGACGCCACG ATGGTGCCCT TCTCGTCGTT CGCAAAGAGC
CACTGGACGT TCGGGCCGCC ACAGATCGAG CGCTACAACC GGCAGCTCGC CGCGGGCATG
TCGGCCGCCA CGCGACCCGG CGTGAGCACC GGCGAGGCGA TGACGGCAGT CGAACAGCTT
GCGCGCAAAC TGCCGCCCGG CTTCGCCGTG GAATGGACGG GGCAGTCGTA TCAGGAGAAG
CAGGCCGGCT CGCAAGCCAC GGTGCTCTAT GCGATCTCGC TCGTCGTCGT GTTCCTGTGC
CTTGCGGGCC TCTACGAAAG CTGGTCGATT CCGCTTGCGG TGCTGCTCGT CGTGCCGCTC
GGTGTGCTGG GCGCGTTACT GGCCGCTCAC GGGCGCGGGC TTTCGAACGA CATCTACTTC
AAGGTGGGCC TGCTGGCCAC TATCGGTCTG TCCACGAAGA ACGCCATCCT GATCGTCGAG
TTCGCGAAGG ATCTGCAGGC GCAGGGGCAC AGCCTCGTGG ACGCCGTACT CGAAGCCGCC
CACATGCGGC TGCGCCCCAT TCTCATGACT TCGCTCGCGT TCGTGTTCGG CGTGCTGCCG
CTCGTCATCA GTACGGGTGC CGGCGCCGGC GCACGCCACG CCATCGGCAC GGGCGTGACG
GGCGGCATGA TCGCGGCCAC GGTGCTCGCC ATCTTCTTCG TACCGGTCTT CTTCGTCGTG
GTGCGCAGGC TGTTCAACGA ACACGGCCAC ACCACGGACT CCGCCGACAT CAACGAGGGC
AACGCATGA
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| Protein sequence | MAEFFIKRPI LAWVMAIVIM LVGAAAVTSL PVAQYPTIAP PSVQVTATYP GASADTVAAT
VTQVIEQKLS GIDNVLYMSS TSSSAGQATI TLTFNPGTNP DIAQVQVQNK VTQATPTLPQ
TVQEQGVQVA KASTSFLMIV ALSSPGGTWN SVDLGNIIAT RIEDPLAQLN GVGDVTLFGA
QHAMRIWLNP VKLHSFGLTP SDVTTAITNQ NVELSTGQVG GSPATDSQAI NATIRSSSLL
TTADQFASIL LRVNSDGSRV LLKDVARVEV GGDSYDTSSR LNGKPASALA IKLATGANAL
DAADAVRAKL AEIQLQLPKD VAISYPYDTT PFVRISIEEV VKTLFEAVVL VFLVMYLFLQ
NVRATLIPTI VVPVALLGTF GVMSMIGFSI NVLSMFAMVL AIGLLVDDAI VVVENVERIM
SEEKLGPKEA THKAMGQITG ALVGVTTVLT AVFIPMAFFA GSTGAIYRQF SITIVSAMLL
SVMLALTLTP ALCATLLKRA DVEHHEKRGF FGWFNRWFAK SNAGYSSSLA RVVARPARYM
LLYGAIAGVV ALLYVTLPSS FLPDEDQGYF IVSISAPAGT PASRTLKTVE AVEQYVLKDE
PGVKQVIAIN GFSFNGQGQN NAIAFVTLKD WSLRGSRDSA SAIIARANQH FAGNRDARIF
VLNPPAIQEL GTQSGLDFEI EDRGGAGHDK LLAVRNQFLG MASKEPTLAM VRPSGLEDTP
QLQVDIDREK ANALGLSISD VNDTLQTAFG SSYVNNYIDT GRVQKVYVQS DAPYRMMPAD
LGDWYVKAGS SSSSSSSSST TTSTTGYDAT MVPFSSFAKS HWTFGPPQIE RYNRQLAAGM
SAATRPGVST GEAMTAVEQL ARKLPPGFAV EWTGQSYQEK QAGSQATVLY AISLVVVFLC
LAGLYESWSI PLAVLLVVPL GVLGALLAAH GRGLSNDIYF KVGLLATIGL STKNAILIVE
FAKDLQAQGH SLVDAVLEAA HMRLRPILMT SLAFVFGVLP LVISTGAGAG ARHAIGTGVT
GGMIAATVLA IFFVPVFFVV VRRLFNEHGH TTDSADINEG NA
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