Gene Bcenmc03_6424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6424 
Symbol 
ID6125347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp460610 
End bp461377 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID641647437 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001774034 
Protein GI170734920 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAT CGCTGAAAGG CAAGACCGCG CTCGTGACCG GCGCGTCACG CGGCATTGGC 
CGCGCGATCG CCGAACGTCT TGCCAGGGAC GGCGCGACCG TCGCACTGAC CTACAACGCC
AGCAAATCCG GCGCGGACGA GGCGATCGCT GCGATCGAGA AAGCGGGCGG CACCGCGTTT
GCGATCCATG CGGATCTCGT CGACCCGGCG AGCGTCCCGG CGTTGTTCGA AACACTCGAC
GACGAGCTCA CCCGGCGCAA CGGCAGCAAG ACCCTCGACA TTCTGGTCAA CAACGCCGGC
AATTCCGGCT GGCTCGGCTT CAAGGATGCG ACGCCGGAAA GCTGGGACAC GCTTATGGCC
GTTTATGCCC GCGCGCCCTT CTTCATCATC CAGGCCGCGC TGGATCGCCT CGCCGATGGC
GGATGCATAG TCAACATTTC ATCCGCTGCC GCCACGAAGC CCGTCACGGC GGCGCCCGTC
TACTCGATGG CGAAAGCGGC GATCAACACG CTGACCCATA CGCTCGCCAT CGAGCTGGGG
CCGCGTGGCA TCACCGCGAA CGCCGTCGCA CCGGGCTTCA CGCGAACGGA TGCGAACGCC
GCCTTTCGCG AGAATCCCGA CCTCGTCAAG GCAGCGGAGG CGCAAATCGC ACTGGGTCGA
TTCGGCGAGC CTTCGGAAAT CGCCGCCGTC GTCGCGTTTC TAGCTTCGGA TGACGGTCAT
TGGGTGACCG GCCAGACGAT CGAGGCGAGC GGCGGCTACA AGCTCTGA
 
Protein sequence
MTQSLKGKTA LVTGASRGIG RAIAERLARD GATVALTYNA SKSGADEAIA AIEKAGGTAF 
AIHADLVDPA SVPALFETLD DELTRRNGSK TLDILVNNAG NSGWLGFKDA TPESWDTLMA
VYARAPFFII QAALDRLADG GCIVNISSAA ATKPVTAAPV YSMAKAAINT LTHTLAIELG
PRGITANAVA PGFTRTDANA AFRENPDLVK AAEAQIALGR FGEPSEIAAV VAFLASDDGH
WVTGQTIEAS GGYKL