Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6424 |
Symbol | |
ID | 6125347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 460610 |
End bp | 461377 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641647437 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001774034 |
Protein GI | 170734920 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAT CGCTGAAAGG CAAGACCGCG CTCGTGACCG GCGCGTCACG CGGCATTGGC CGCGCGATCG CCGAACGTCT TGCCAGGGAC GGCGCGACCG TCGCACTGAC CTACAACGCC AGCAAATCCG GCGCGGACGA GGCGATCGCT GCGATCGAGA AAGCGGGCGG CACCGCGTTT GCGATCCATG CGGATCTCGT CGACCCGGCG AGCGTCCCGG CGTTGTTCGA AACACTCGAC GACGAGCTCA CCCGGCGCAA CGGCAGCAAG ACCCTCGACA TTCTGGTCAA CAACGCCGGC AATTCCGGCT GGCTCGGCTT CAAGGATGCG ACGCCGGAAA GCTGGGACAC GCTTATGGCC GTTTATGCCC GCGCGCCCTT CTTCATCATC CAGGCCGCGC TGGATCGCCT CGCCGATGGC GGATGCATAG TCAACATTTC ATCCGCTGCC GCCACGAAGC CCGTCACGGC GGCGCCCGTC TACTCGATGG CGAAAGCGGC GATCAACACG CTGACCCATA CGCTCGCCAT CGAGCTGGGG CCGCGTGGCA TCACCGCGAA CGCCGTCGCA CCGGGCTTCA CGCGAACGGA TGCGAACGCC GCCTTTCGCG AGAATCCCGA CCTCGTCAAG GCAGCGGAGG CGCAAATCGC ACTGGGTCGA TTCGGCGAGC CTTCGGAAAT CGCCGCCGTC GTCGCGTTTC TAGCTTCGGA TGACGGTCAT TGGGTGACCG GCCAGACGAT CGAGGCGAGC GGCGGCTACA AGCTCTGA
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Protein sequence | MTQSLKGKTA LVTGASRGIG RAIAERLARD GATVALTYNA SKSGADEAIA AIEKAGGTAF AIHADLVDPA SVPALFETLD DELTRRNGSK TLDILVNNAG NSGWLGFKDA TPESWDTLMA VYARAPFFII QAALDRLADG GCIVNISSAA ATKPVTAAPV YSMAKAAINT LTHTLAIELG PRGITANAVA PGFTRTDANA AFRENPDLVK AAEAQIALGR FGEPSEIAAV VAFLASDDGH WVTGQTIEAS GGYKL
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