| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6277 |
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| Symbol | |
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| ID | 6125203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 278345 |
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| End bp | 279928 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641647293 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001773890 |
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| Protein GI | 170734776 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0281814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.114415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG ATATCGACAA CGGCGGCAAG GGCGGCTTCA CGCGCCGCGA CATGATGAAG
GTCATGGCGG CGGGCGGCAT GATGGCCGCC GGCGCCGGCG GACTGCTGAT GACCCCCGAC
TCCGCCTTCG CCGCGCCCGC GCCGAAGCGC GGCGGCAAGA TCCGGGTCGC GAACGAAGCC
GGCTCGACGG CCGATACGCT CGACCCGGCC AAGGGTTCGA CGGGCGCGGA CTACACGCGC
TTCTTCATGT TCTACAGCGG CCTCACGCAG CTCGATGCGA GCCTGACGCC GCAGATGAAC
CTCGCCGAGT CGCTGCAGAC GACCGATGCG AAGACGTGGA TCATCAAGCT GCGCAAGGGC
GTCACGTTCC ACGACGGCAA GCCGGTCGGC CCGGCCGACG TGGTGTATTC GCTGATGCGC
CACAAGAACC CGGCCACCGC GTCGAAGGTC AAGCCGCTCG CCGAACAGTT CGCGGAGGCG
AAGGCGACCG GCCCCGACGA AGTCACGTTG ACGCTCGCCA GCGCGAACGC GGACCTGCCG
GTAATCCTCG CGACGCCGCA GCTCGTGATC GTCAAGGACG GCACGACCGA CTTCAGCACC
GGCATCGGCT GCGGCCCGTA CAAGCTCAAG TCGTTCAAGC CGGGCGTGTC GACCGTCGGC
GTGCGCAACG ACAGCTACTT CAAGCCGGGC AAACCGTATC TCGACGAGAT CGAGCTGATC
GGCATCAGCG ACAGTGCCGC GCGCCTGAAC GCGCTGCTGT CGGGCGACGT GCACCTGATC
AACGCGATCG ATCCGCGCTC GACGCAGCGG GTCTCGTCGA CGCCGGGCTA CGCGCTGAAG
GAAACCAAAT CGGGCCTCTA CACCGACCTG ATCATGCGCA GCGACAACCC GATCGTCGCG
AACCCCGATT TCGTCGAAGG GATGAAGTAC CTGTTCGATC GCGAGCAGCT CCGCACGGCG
GTGTTCCGCG GCTACTCGGT GATCGGCAAC GATCAGCCGA TTCCGCCGGG GCATCGTTAC
TTCAACGCGT CGCTGCCGCA GCGCGCGCAC GATCCGGACA AGGCGAAGTT CCTGCTCCAG
AAGGCGGGGG CGCTCGGCGC CACGCTGCCG CCGATCTATG CGACGTCCGA CGCGAACGGG
TCGATCGAAA TGGCCGTGCT GCTGCAGCAG GCCGGCCAGA AGATCGGGCT GAACCTGCAG
GTCAACCGCG CGTCGCCCGA CGGCTACTGG TCGAACCACT GGATGAAGCA TCCGCTCACG
TTCGGCAACA TCAACCCGCG CTCGAGCGCC GACGTGCTGT TCACGCAGTT CTTCAAGTCG
GATGCGCCGT GGAACGAATC GGGCTGGAAG AACGCGAAGT TCGACCAGCT GCTGCTCGCC
GCGCGCTCGG AAACCGACGA CGCGAAGCGC AAGCAGATGT ACGGCGACAT GCAGGTGATC
GTGTCGCAGC AGGGCCGGGT CGGCATTCCG GCGTTCATCA GCTTCCTCGA CGGGTACGAC
AAGCGGCTCG CGGGCCTCGG TTCGATTCCG ACCGGCGGGA TGATGGGTTT CATGTTCGCC
GAGAACGTGT GGTGGAACGC ATGA
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| Protein sequence | MSDDIDNGGK GGFTRRDMMK VMAAGGMMAA GAGGLLMTPD SAFAAPAPKR GGKIRVANEA
GSTADTLDPA KGSTGADYTR FFMFYSGLTQ LDASLTPQMN LAESLQTTDA KTWIIKLRKG
VTFHDGKPVG PADVVYSLMR HKNPATASKV KPLAEQFAEA KATGPDEVTL TLASANADLP
VILATPQLVI VKDGTTDFST GIGCGPYKLK SFKPGVSTVG VRNDSYFKPG KPYLDEIELI
GISDSAARLN ALLSGDVHLI NAIDPRSTQR VSSTPGYALK ETKSGLYTDL IMRSDNPIVA
NPDFVEGMKY LFDREQLRTA VFRGYSVIGN DQPIPPGHRY FNASLPQRAH DPDKAKFLLQ
KAGALGATLP PIYATSDANG SIEMAVLLQQ AGQKIGLNLQ VNRASPDGYW SNHWMKHPLT
FGNINPRSSA DVLFTQFFKS DAPWNESGWK NAKFDQLLLA ARSETDDAKR KQMYGDMQVI
VSQQGRVGIP AFISFLDGYD KRLAGLGSIP TGGMMGFMFA ENVWWNA
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