Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6233 |
Symbol | |
ID | 6124981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 234052 |
End bp | 234840 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641647250 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001773847 |
Protein GI | 170734733 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.220115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGT TGCTCGAAGA CAGGATCGTC GTCGTGACGG GCGGATCGCG CGGGATCGGC CGTGCGATTG CGCTGGCGTG TGCGCGGCAT GGCGCCGATA TCGTCGTCAA CTACTGGACG AACCCGCTGC TGCCCGCGCA GGCCGAGCAC GAGATCGACG CGCTCGTCGA TGCGATCCGC GCGACGGGGC GCGACGCGCT GGCCGTGCCG GGCGACGTCG CACGGCCCGA CACGGCAAAC GCGCTGGTCG CGGCCGCAGT CGAGCGATTC GGCCGGATCG ACGTGCTGGC GAGCAATGCC GGAATCTGCC CGTTCCACGG CTTCCTGGAC TTGCCGCCCG AGCTGCTGCA ACGAACGATG GAAGTGAACC TGCACGGCGC GTTCTACATG ACCCAGGCCG TCGCCCGACA AATGGCCGCG CAAGGGCGCG GCGGCGCGAT CGTCGCGACC AGCTCGATCA GCGCGCTGGT CGGCGGCGGC ATGCAGACGC ACTACACGCC GACCAAGGCC GGCGTCCATG CGCTGATGCA GTCGTGCGCA GTCGCGCTCG CGCCGCACCG GATTCGCTGC AATTCGGTGC TGCCCGGCAC GATCCGCACC GAAATCAACG ACGACGATCT CGCCGCGCCC GGCAAGACCG AGTACTTCGA GCGCAGGATT CCGCTCGGTC GCCTCGGCGA GCCGGACGAC GTCGCCGACT GCGTCGTGTT TCTCGCGTCC GACATGGCGC GCTACGTGAA CGGCGCCGCG CTGCTCGTCG ACGGCGGCAT GTACGTGAAC CTTCAGTGA
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Protein sequence | MTKLLEDRIV VVTGGSRGIG RAIALACARH GADIVVNYWT NPLLPAQAEH EIDALVDAIR ATGRDALAVP GDVARPDTAN ALVAAAVERF GRIDVLASNA GICPFHGFLD LPPELLQRTM EVNLHGAFYM TQAVARQMAA QGRGGAIVAT SSISALVGGG MQTHYTPTKA GVHALMQSCA VALAPHRIRC NSVLPGTIRT EINDDDLAAP GKTEYFERRI PLGRLGEPDD VADCVVFLAS DMARYVNGAA LLVDGGMYVN LQ
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