Gene Bcenmc03_6233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6233 
Symbol 
ID6124981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp234052 
End bp234840 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID641647250 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001773847 
Protein GI170734733 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.220115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGT TGCTCGAAGA CAGGATCGTC GTCGTGACGG GCGGATCGCG CGGGATCGGC 
CGTGCGATTG CGCTGGCGTG TGCGCGGCAT GGCGCCGATA TCGTCGTCAA CTACTGGACG
AACCCGCTGC TGCCCGCGCA GGCCGAGCAC GAGATCGACG CGCTCGTCGA TGCGATCCGC
GCGACGGGGC GCGACGCGCT GGCCGTGCCG GGCGACGTCG CACGGCCCGA CACGGCAAAC
GCGCTGGTCG CGGCCGCAGT CGAGCGATTC GGCCGGATCG ACGTGCTGGC GAGCAATGCC
GGAATCTGCC CGTTCCACGG CTTCCTGGAC TTGCCGCCCG AGCTGCTGCA ACGAACGATG
GAAGTGAACC TGCACGGCGC GTTCTACATG ACCCAGGCCG TCGCCCGACA AATGGCCGCG
CAAGGGCGCG GCGGCGCGAT CGTCGCGACC AGCTCGATCA GCGCGCTGGT CGGCGGCGGC
ATGCAGACGC ACTACACGCC GACCAAGGCC GGCGTCCATG CGCTGATGCA GTCGTGCGCA
GTCGCGCTCG CGCCGCACCG GATTCGCTGC AATTCGGTGC TGCCCGGCAC GATCCGCACC
GAAATCAACG ACGACGATCT CGCCGCGCCC GGCAAGACCG AGTACTTCGA GCGCAGGATT
CCGCTCGGTC GCCTCGGCGA GCCGGACGAC GTCGCCGACT GCGTCGTGTT TCTCGCGTCC
GACATGGCGC GCTACGTGAA CGGCGCCGCG CTGCTCGTCG ACGGCGGCAT GTACGTGAAC
CTTCAGTGA
 
Protein sequence
MTKLLEDRIV VVTGGSRGIG RAIALACARH GADIVVNYWT NPLLPAQAEH EIDALVDAIR 
ATGRDALAVP GDVARPDTAN ALVAAAVERF GRIDVLASNA GICPFHGFLD LPPELLQRTM
EVNLHGAFYM TQAVARQMAA QGRGGAIVAT SSISALVGGG MQTHYTPTKA GVHALMQSCA
VALAPHRIRC NSVLPGTIRT EINDDDLAAP GKTEYFERRI PLGRLGEPDD VADCVVFLAS
DMARYVNGAA LLVDGGMYVN LQ