Gene Bcenmc03_6192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6192 
Symbol 
ID6125166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp190009 
End bp191040 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content68% 
IMG OID641647210 
ProductABC transporter substrate binding protein 
Protein accessionYP_001773807 
Protein GI170734693 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTT CGTTCTTGCC GGCGCGTCGT GCGCTGGCGG CCACGCTCAC CGCCGCGCTC 
GCCTTCGCCG GCGCGGTCAT CCCGCAAGCC GCGCACGCGG AAGGCCGCAT CCGCATCGCC
GAGCAGTTCG GCGTCGTCTA CCTGATGCTG AACGTCGCGC GCGACCAGCA ACTGATCGAG
AAGGAAGGGC GCAAGGCCGG CCTCGACATC AAGGTCGACT GGGTGCGGCT GTCGGGCGGC
GCGGCCGTGA ACGACGCGCT GCTGTCCGGC GCGGTGGACA TCGCGGGCGC GGGCGTCGGG
CCGCTGTTGA CCGTGTGGGA CCGCACGCGC GGCCGGCAAA ACGTGAAGGG CGTCGCGTCG
CTCGGCAATT TTCCGTACTA CCTCGTGAGC AGCAACCCGA ACGTGAAGAC GATCGCCGAC
CTGAGCGCGA AGGACCGCAT CGCGGTGCCG GCGGTCGGCG TGTCGGTGCA GTCGCGCGTG
CTGCAGTACG CGGCCGCGAA GCAGTGGGGC GACAAGCAGT TCGACAAGCT CGACCCGCTC
ACGCAGGCGA TTCCGCATCC GGACGCCACG GCCGCGATTC TCGCGAACAG CAACGTGATC
ACCGGCCACT TCGGCAATCC GCCGTTCCAG GAGCAGGAAC TTGCCGGCAA CCCGAACGCG
CACATCGTGC TGAATTCGTA TGACGTGCTC GGCGGCCCGA GCTCCGCGAC GGTGCTGTAC
GCGACCGAGA AGTTCCGCGA CGACAACCCG AAGACCTACC GGGCGTTCGT CGCCGCGCTG
GCCGACGCCG CCCGGCAGAT CGCGGCCGAC CCCGAGCGCG CGGCCGATAC CTATATTCGC
GTGAACGGGT CGAAGATCGA TCGCGCGCTG CTGCTGAAGA TCCTGCGCAA TCCGCAGGTG
CAGTTCAAGA CCGCGCCGCA GAACACGCTG CCGCTCGCGC AGTTCATGCA TCGCACCGGC
GCGATCCGCA ACGAACCGAA GTCGTGGCGC GACTACTTCT TCGACGATCC GGCGACGGCC
GGCGGCAGTT GA
 
Protein sequence
MSFSFLPARR ALAATLTAAL AFAGAVIPQA AHAEGRIRIA EQFGVVYLML NVARDQQLIE 
KEGRKAGLDI KVDWVRLSGG AAVNDALLSG AVDIAGAGVG PLLTVWDRTR GRQNVKGVAS
LGNFPYYLVS SNPNVKTIAD LSAKDRIAVP AVGVSVQSRV LQYAAAKQWG DKQFDKLDPL
TQAIPHPDAT AAILANSNVI TGHFGNPPFQ EQELAGNPNA HIVLNSYDVL GGPSSATVLY
ATEKFRDDNP KTYRAFVAAL ADAARQIAAD PERAADTYIR VNGSKIDRAL LLKILRNPQV
QFKTAPQNTL PLAQFMHRTG AIRNEPKSWR DYFFDDPATA GGS