Gene Bcenmc03_6146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6146 
Symbol 
ID6125120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp146078 
End bp147139 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content72% 
IMG OID641647164 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_001773761 
Protein GI170734647 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.870856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.304247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCGTTC CGCCGTCCAC GAAAACGCGT CGTATTACAC GCATCGCACC GTTGGCGTGG 
GCGGTCGCGC CGGTCGTCGC GCGCGCGGCC GCCGAGCCTG CGGCGCCAGG CAATCCTGCC
GCGCCGCTGC CGCTCGCGTA CGTCGTGCAT GCGGCCGGCC CCGCCGCGCA GCCGGTCTTC
GTGCTCGGCT GGGCGCTGCT CGCGCTGTGC ACGTTCGTCT GCGTCGCGAT CGCCGTGCTG
CTGCTGATCG CGCTGTTCCG CCGTCGCGCG CAGGCGGGCG GCGGCTACGG CAGCGGGCTG
ACGATCGTGA CCGTCGGCAC CGCGATCTCG ATCCTGCTGC TGTTCGGCGC GCTTGTGTAC
ATGCTGCGCG TGCTGGGTGC GGTCGCGGCG CCGCCGCGTC CGCCCGCGCT GACGATCACC
GTCACCGCGC AGGACTGGTG GTGGGCCGTG CGTTATCCGG ACGATGCGAA CGGCCCTAGC
TTCGTCACGG CGAACGAGAT TCATATTCCG GTGGGCGAGC CCGTCGCGAT CGAACTGAAG
AGCGCCGATG TGATCCACGC GTTCTGGGTG CCGCAACTCG CCGGCAAGAC CCAGACGATT
CCCGGCCAGA CCAACCGCCA ATGGCTGCAG GCCGACCGGC CTGGCGTCTA CCGCGGGCAG
TGCTCGCAAT ACTGCGGCGC GCAGCACGCG CACATGGCGT TCGAAGTCGT GGCCGAGCCG
CCGGCCGCGT TTCATGCGTG GCTCGCCGCG CAGCGCCAAC CGGCCCCGGC ACCCGCGGCG
GGCGCCGGCA CCGAACACCG TGGCCAGCGC GTATTCGCCG CACGCTGCGC CGGCTGCCAC
GCGGTGCGCG GCACCGATGC CGCGGGCGAC GCGGGCCCCG ATCTCACGCA CGTCGGCACG
CGCCGGCTGC TCGCGGCCGG CACGCTCGAC AACACCCCCG ACAACCTGCG CCGCTGGATC
GCGCATGCGC AGCAGGTCAA GCCGCAGTCG CTGATGCCGT CGATCGCGCT CGCGCCGCGC
GATGCCGACG ATCTCGCCGC GTATCTCGCG ACGCTGCACT GA
 
Protein sequence
MLVPPSTKTR RITRIAPLAW AVAPVVARAA AEPAAPGNPA APLPLAYVVH AAGPAAQPVF 
VLGWALLALC TFVCVAIAVL LLIALFRRRA QAGGGYGSGL TIVTVGTAIS ILLLFGALVY
MLRVLGAVAA PPRPPALTIT VTAQDWWWAV RYPDDANGPS FVTANEIHIP VGEPVAIELK
SADVIHAFWV PQLAGKTQTI PGQTNRQWLQ ADRPGVYRGQ CSQYCGAQHA HMAFEVVAEP
PAAFHAWLAA QRQPAPAPAA GAGTEHRGQR VFAARCAGCH AVRGTDAAGD AGPDLTHVGT
RRLLAAGTLD NTPDNLRRWI AHAQQVKPQS LMPSIALAPR DADDLAAYLA TLH