Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6034 |
Symbol | |
ID | 6125009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 17188 |
End bp | 17937 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641647053 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001773650 |
Protein GI | 170734536 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.311099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.357873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCGA CTCACGATCC AGCCAAACCG CCGCTCGCCG GCCGGACCGC ACTCGTGACC GGGGGCGGCC GCGGTCTTGG CGAAGCCATT TGCGAAGAGC TTGCGCAGCA CGGCGCGCAC GTCGTCGTCG CCGATCTCGA CGGCGACCGC GCGGCGGCCG TCGCGCAGCG GCTCGAGCGG CACGGCGGAC AGGCGGTGGG CCGCCCGCTC GACGTGCGCG ACGAGGCGTC GGTGCTGCAG GTCGTGCACG ATGCGCGCGA GTCGCTCGGC GAGCTCGACG TGATCGTCAA CAACGCGGCG ATCGACGTGA CCGCGCCGAT CGACGACGTG AGCGTCGACG CGTGGCAGCA GGTGCTGATG ACGAACCTGT TCGGCCCGTA CCTGATGTGT CACGCGGCCG TGCCGATGAT GAAGGCGCGC GGCAACGGGC ATATCGTCAA CATCGCGTCG ACCGCGTCCA AGCGCGCGTG GCCGAACGCG TCCGCGTATC ACGCGACGAA GTGGGGGCTG CTCGGGCTGT CGCACGCGCT GCACGCCGAA CTGCGGCCGA GCGGCGTGCG CGTGTCGGCG ATCGTCGCGG GCGGGATGCG CACGCCGTTT CTGCTCGACC GTTTCCCGGA CATCGACGAG GACACGCTGC AGCCGCCCGA GCACGTCGCG GCCGCCGTGC GCTTCGTGCT GACCCAGCCG CCGGGCACCG TGGTGCCCGA GCTGATGGTG CTGCCGATGA AGGAGACGTC ATGGCCCTGA
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Protein sequence | MNATHDPAKP PLAGRTALVT GGGRGLGEAI CEELAQHGAH VVVADLDGDR AAAVAQRLER HGGQAVGRPL DVRDEASVLQ VVHDARESLG ELDVIVNNAA IDVTAPIDDV SVDAWQQVLM TNLFGPYLMC HAAVPMMKAR GNGHIVNIAS TASKRAWPNA SAYHATKWGL LGLSHALHAE LRPSGVRVSA IVAGGMRTPF LLDRFPDIDE DTLQPPEHVA AAVRFVLTQP PGTVVPELMV LPMKETSWP
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