| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6020 |
|---|
| Symbol | |
|---|
| ID | 6124995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 2361 |
|---|
| End bp | 3785 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641647039 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001773636 |
|---|
| Protein GI | 170734522 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.492916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.125321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCT ACGAGAAATT TGCGAACGAC GTAGAGCGAC TCATTCGGCA AGGCGTATAT
CGACACGGCG ACCGTGTGCC GTCGGTGCGG CAGGCGAGCC AGCAGCACCG GATCAGCATC
ACGACCGTGT TGCATGCCTA TCTGCTGCTG GAAAGCCGCG GGCTGCTCGA AAGCCGGCCG
CAGTCGGGCT ATTTCGTGAA CCTGCGGCGC GACGACGGCC ATGCGCCGGT GCGCGAGCTG
CGGCCGTCGA AGCCGATCGC GATCTCGTCG TCGGTGGACG TGAGCCGGCT CGTGCTGTCG
ACGCTGCGTT CGATCGGCAC GGACGACGCG GTGCCGCTCG GCTCGCCGTA TCCGGACCCG
AGCCTGTTTC CGTTCGAGAA GCTGAACCGC TACGCGTACG CGGCCGGTCG CGACAAGTCG
CTGTGGGGCG TGACCGACGG GCTGCCGCCC GGACACCCGC GGCTGATCCG GCAGATCGCG
CGGCGCTACC TGGAAAACGG GATGTCGGTG GACCCGAACG AGATCATCGT GACGGTCGGC
GCGACGGAGG CGATCAACCT GTGCCTGCAG GCGGTGGCGA AGCCGGGCGA CACGATCGCG
GTGGAGTCGC CGACGTTCTA CGCGATGCTG CACGCGATCG AGCGGATGGG GATGAAGGCG
ATCGAAGTGG CCACGCATCC GGAATACGGG ATCGACATCG CGGCGCTGGC CGCGATCGCG
AAGTCGCAGC CGATCGCCGC ATGCATGGTG ATGCCGAACT TCCAGAACCC GCTGGGCTTC
CAGATGCCGG ACGAGCGCAA GCGCGAACTG GTGGCGTTCG CAACGAAAGC CGACCTGCCG
ATCATCGAGA ACGGCGTGTA CAACGAACTG TATTTCGGCA ACATGCATCC GAGCACGCTG
AAGTCGTTCG ATCGTCATGA CATCGTGCTG CATTGTTCGT CGTTCTCGAA GAGCCTGACG
GCCGCGTACC GGATCGGCTG GGCGTTGCCG GGCCGCTATC GCGAGCAGGT CGAGAAACTG
AAGTTCCTGA ATACGCTGGC GACGCCGTCG TTGCCGCAGC TCGCGATCGC GGAGTTTCTC
GAACGCGACG GCTACGAACA TCACCTGAGG CGGGTTCGCA AGGCGTATGC GCAGCAGGCG
AACCTGATGC GCGCGATGGT GTCGCGGTTC TTCCCGGAGG GCACGCGCAT TTCGAGCCCG
GCAGGCGGAT ACGTGCTGTG GGTCGAGCTG CCCGCGCAGG TCGATGCGAT GCGGCTGTAC
CAGCTCGCGC TGGAGCAGGG AATCACGATC GGCCCCGGCT ACATGTTTTC GATCGCGGAC
ACTTACCGGA ACTTCATCCG CCTGAACTAC AGCAGCCCAT GGTCGCCGGA GATCGAGCGC
GCGGTCGTCA CCGTCGGCAA GCTCGCCGCA TCCTGCATCG ACTGA
|
|---|
| Protein sequence | MKLYEKFAND VERLIRQGVY RHGDRVPSVR QASQQHRISI TTVLHAYLLL ESRGLLESRP
QSGYFVNLRR DDGHAPVREL RPSKPIAISS SVDVSRLVLS TLRSIGTDDA VPLGSPYPDP
SLFPFEKLNR YAYAAGRDKS LWGVTDGLPP GHPRLIRQIA RRYLENGMSV DPNEIIVTVG
ATEAINLCLQ AVAKPGDTIA VESPTFYAML HAIERMGMKA IEVATHPEYG IDIAALAAIA
KSQPIAACMV MPNFQNPLGF QMPDERKREL VAFATKADLP IIENGVYNEL YFGNMHPSTL
KSFDRHDIVL HCSSFSKSLT AAYRIGWALP GRYREQVEKL KFLNTLATPS LPQLAIAEFL
ERDGYEHHLR RVRKAYAQQA NLMRAMVSRF FPEGTRISSP AGGYVLWVEL PAQVDAMRLY
QLALEQGITI GPGYMFSIAD TYRNFIRLNY SSPWSPEIER AVVTVGKLAA SCID
|
|---|
| |