Gene M446_6847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6847 
Symbol 
ID6130803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7545052 
End bp7545942 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content69% 
IMG OID641646928 
ProductRNA polymerase factor sigma-32 
Protein accessionYP_001773526 
Protein GI170744871 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTG CACTGCCGGT GCTCGCCAAT GAGGGGGGCC TGTCCCGCTA TCTCGACGAG 
ATCCGTCGCT TCCCAATGCT GGAGCCGACG GAGGAGTACA TGCTCGCCAA GAGCTGGCGC
GAGCACGGAG ACCGCGAGGC GGCCCACAAG CTGGTCACGT CCCACCTGCG CCTCGTCGCC
AAGATCGCGA TGGGCTATCG CGGCTACGGC CTGCCGATCG GCGAGGTCGT GTCCGAGGGC
AATGTCGGCC TGATGCAGGC CGTGAAGCGC TTCGACCCCG ACAAGGGCTT CCGCCTGGCC
ACCTATGCCA TGTGGTGGAT CAAGGCGGCG ATTCAAGAAT ACATCCTGCG CTCGTGGTCG
CTCGTGAAGA TGGGCACGAC CGCGAACCAG AAGAAGCTGT TCTTCAACCT GCGCAAGGCG
AAGGGCCGCA TCTCGGCCCT CGACGAGGGC GACCTGCGCC CCGAGCAGGT GAAGCAGATC
GCCACGCGCC TCGGCGTGCC CGAGCAGGAC GTGATCGAGA TGAACCGCCG CCTCAGCGGC
GACGCCTCGC TCAACGCCCC CCTGCGCGAG GAGGGCGAGG GCGAGTGGCA GGATTGGCTG
GTGGATGACA GCCCGAGCCA GGAAGCCGTG CTCGCCCGCG AGGAGGAGGG GCAGAACCGC
CTCGCCGCCC TGCGGGACGC GCTCAGCGTG CTCAACCCGC GCGAGCGGCG CATCTTCGAG
GCCCGGCGCC TCGCCGAGGA GCCGATCACC CTGGAGGACC TGTCGAGCGA GTTCGGCGTC
TCCCGCGAGC GGGTGCGCCA GATCGAGGTC AGGGCGTTCG AGAAGGTTCA GGACGCCGTG
AAGCGCAACC TCGCCAGCCG CGAGACCGCG CGGACGAGCG TGCCGGCCTA G
 
Protein sequence
MAAALPVLAN EGGLSRYLDE IRRFPMLEPT EEYMLAKSWR EHGDREAAHK LVTSHLRLVA 
KIAMGYRGYG LPIGEVVSEG NVGLMQAVKR FDPDKGFRLA TYAMWWIKAA IQEYILRSWS
LVKMGTTANQ KKLFFNLRKA KGRISALDEG DLRPEQVKQI ATRLGVPEQD VIEMNRRLSG
DASLNAPLRE EGEGEWQDWL VDDSPSQEAV LAREEEGQNR LAALRDALSV LNPRERRIFE
ARRLAEEPIT LEDLSSEFGV SRERVRQIEV RAFEKVQDAV KRNLASRETA RTSVPA