Gene M446_6549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6549 
Symbol 
ID6134007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7202783 
End bp7204132 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content76% 
IMG OID641646636 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_001773239 
Protein GI170744584 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.476285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCACG ATTCCGTTCC CTCGCCGATC ACCGCCCGGG CCGGGACGCC CCTGCGGGGG 
CGGCTGCGCC CGCCCGGCGA CAAGTCCATC TCGCACCGGG CGATGATCCT CGGCCTGCTC
AGCCTCGGCG AGACCCGGGT CGAGGGCCTG CTGGAGGGCG ACGACGTGCT GCGCACCGCC
GCCGCCGCCC GGGCGCTCGG CGCCGGGATC GACCGCGACG GGCCGGGCCG CTGGCGGGTG
CGCGGCGTCG GCATCGGCGG CCTGTCGGAT CCCGAGGGCG TGCTCGATTT CGGCAATGCC
GGCACCGGCT CGCGGCTGAT GATGGGCGTC GTCGGCGGCC AGCCCGTCAC CGCGACCTTC
GACGGCGACG CCTCGCTGCG CAAGCGGCCG ATGCGGCGGA TCCTCGACCC GCTGGTGCAG
ATGGGCGCGC AGATCCTGTC CGAGCAGGCG GGCGGGCGCG TGCCGCTGAC GCTGCGCGGC
CCGGAGGAGG CGATCCCGAT CACCTACGCG ACGCCGGTCG CCTCCGCGCA GGTGAAGTCG
GCGGTGCTGC TCGCCGGCCT CAACGCGCCC GGCACCACCA CGGTGATCGA GGCCGCCGCG
ACCCGCGACC ACACCGAGCG GATGCTGCGC CTGTTCGGCG CCGAGGTCAC GGTCGCGGCG
CACGGGCCCG CGGGCCACGG CCGCGCCATC GCGCTCACGG GCCAGCCGAC CCTGCGGGCG
GCCGAGGTGA TCGTGCCGGC CGACCCGTCC TCGGCCGCCT TCCCGATCGT CGCGGCGCTG
ATCGTGCCGG GCTCGGACGT GGTGATCGAG GGGGTGATGA TGAACCCGCT GCGGACCGGG
CTCATCACCA CGCTGATCGA GATGGGCGCC GACATCGCGC GGCTGAACGA GCGCGACGAG
GGCGGCGAGA CGGTGGCCGA CCTGCGGGTG CGGGCGAGCC GCCTCGCCGG GGTGACGGTG
CCGCCCGAGC GCGCGCCCGC GATGATCGAC GAGTACCCGG TCCTCGCCGT GGCGGCGGCC
TTCGCGGAGG GCACGACGCG GATGCAGGGC CTGCACGAAT TGCGGGTGAA GGAATCGGAC
CGCCTCGCCG CGGTGGCGGA CGGCCTCAGG GCCAACGGCG TCGCCCACGC GGTCGAGGGC
GACGACCTGA TCGTGCACGG GGACGGCCGG CCGGCCCCCG GCGGCGGCAC CGTGGCGACG
CACCTCGACC ACCGCATCGC CATGGCGTTC CTGGTGATGG GGCTGGCCGC CGGGGAGCCG
GTGACGGTCG ACGACGGCGC CATGATCGCG ACGAGCTATC CGGCCTTCCT GGCCGATCTG
CGGGGCCTCG GCGCCGCCTT CGCCGAGTGA
 
Protein sequence
MSHDSVPSPI TARAGTPLRG RLRPPGDKSI SHRAMILGLL SLGETRVEGL LEGDDVLRTA 
AAARALGAGI DRDGPGRWRV RGVGIGGLSD PEGVLDFGNA GTGSRLMMGV VGGQPVTATF
DGDASLRKRP MRRILDPLVQ MGAQILSEQA GGRVPLTLRG PEEAIPITYA TPVASAQVKS
AVLLAGLNAP GTTTVIEAAA TRDHTERMLR LFGAEVTVAA HGPAGHGRAI ALTGQPTLRA
AEVIVPADPS SAAFPIVAAL IVPGSDVVIE GVMMNPLRTG LITTLIEMGA DIARLNERDE
GGETVADLRV RASRLAGVTV PPERAPAMID EYPVLAVAAA FAEGTTRMQG LHELRVKESD
RLAAVADGLR ANGVAHAVEG DDLIVHGDGR PAPGGGTVAT HLDHRIAMAF LVMGLAAGEP
VTVDDGAMIA TSYPAFLADL RGLGAAFAE