Gene M446_6442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6442 
Symbol 
ID6129826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7086081 
End bp7088147 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content71% 
IMG OID641646532 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001773135 
Protein GI170744480 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.381857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG ACCGCGCGCC GGCCCTCCCG GGCCCGGATC CCGCCGGCGG CCCGGCCGCG 
GACCTCCCGC CGATCAGGGT GAAGATCCTG ATCGTGGACG ACGACCGGCG GAACCTGCTC
GCCGTGTCGG AGATCCTCGA CGAGCCAGGC CTCGACCTCG TCCTGGCCGA ATCCGGGGAG
GACGCCCTGC GGCACACGTT GCGGGACGAT TTCGCCCTGA TCCTCCTCGA CGTCCAGATG
CCGCGCATGG ACGGCTACGA GGTGGCGTCC CTCATCCGCA GCCGCTCGCG CTCGTCGCGC
GTGCCGATCC TGTTCCTGAC GGCTTACAAC CGGGAGGAGA TGCACGTCTT CCGCGGCTAC
TCGGCCGGCG CCGTGGACTA CGTCTTCAAG CCGATCCAGC CGCTCGTCCT CAAGTCGAAG
GTCAGCGTCT TCGTCGACCT TCACCGCAAG ACCGAGGAGA TCAAGCTGAA GGCCTCGGCC
GAGAAGAAGC TCCTGCTGGA GAACCTGCGG GTTCGGGGCG AGAAGCTGGA GGCCGAGCGG
GCCCTGCGGC GGCGCGACGC GCATCAGGCC GCCGTGCTGC GCGGGCTCCC GATCGCCCTC
TACACGGCCT CGCACCAGGG GGATCACCGC CGCCTGCGCT TCACCAACGA GAGCGTCGAG
CGGGTCAGCG GCTTCGGCGC GGAGGCGTTC GCGGATCCGG GCCTCTGGCT GTCGCGGCTC
AACCCCGAGG ACCGCGACCG GGTGCTCGAC GCGCTGCGGG CGGTCGGGCG CACGGGCGCG
GCGACGCTGG AATACCGCTG GCGCCACGCG GACGGGAGCG AGCGGCACAT CCTCGATCAG
GTCGTGGCCA ATCGGGGCGA GGAGGCCGCG CCCGGCGAGG TCTTCGGGAT GTGGTTCGAC
ATCACCGAGC GCAAGGAGAT GGAGCTGAGC CTGGTGCACG CCTCCAAGCT CGAGGCGGTC
GGCCGGCTCA CCGGCGGCGT CGCCCACGAC TTCAACAACA TGCTGAGCAT CGTGATCGGC
AACCTCGACC TGCTGCAGAA GTCGCTCGTC GCCGACGAGA AGGCGCATCA GCGCGTTCAG
AACGCCATCG ACGGGGCGCA GCGCTGCGCG GAGCTGACGA GCCGGCTCCT CGCCGTCTCG
CGGCGCTCAC CCCTCCAGCC GGCGCCGCTC GACCTCGGCA GCTTCATGCC CGGCCTGGTG
CAGCTGCTGA GGCGGACCCT CGGCGAGCGC ATCGGCGTGA CCCTGGATCT CGGCGACGCT
CCGCCCGCCG TATCCGTCGA CCGCTCGCAA CTCGAGGCGG CGCTGATCAA TCTGGCGGTG
AACGCGCGCG ACGCGATGCC GGAGGGCGGC CATCTCAGCA TCGCGGTGCG ACGCGCCGGG
GAGGCGGATC GCGCGGGCCG CGCCGCCGAC GCGGTCCTGA TCTCCGTCGC CGACACGGGC
ACCGGCATGC CGGCCTCGGT GCTCGCGCGC GTGTTCGAGC CCTTCTTCAC CACCAAGGCG
GAGGGCAAGG GGACGGGCCT CGGCTTGAGC ATGGTCCACG GCTTCCTCCA GCAGAGCGGC
GGACACATCG ACGTCGAGAG CGTGCCGGGG CAGGGCACCA CCTTCACGAT GTCCCTGCCG
ATCCTCGCCG AGGCGGGCCC CGGGACCCCG GCGGCGCCGG GCGCCGCGCC CCCCGACGAG
GTGAGCGGGG AGGGGAGGAC GGTGCTCGTG GTCGAGGACG ATTCCGAGGT GCGACAGGTC
GCCAAAGCTG CCCTGAAGAC CCTCGGGTTC CACGTCGAGG AGGCCGGAAA CGGCGACGAG
GCCGTGGCCA TGCTGGAGGA GAATTCCGAC GTGGCGCTCG TGCTCAGCGA CGTGAACATG
CCCGGCACCA TCTCGGGGAT CGAGCTCGGC CGCATCGTGC GGCAGCGCTG GCCCAATATC
GGGATCGTGC TGGCCTCGGG GTACCTCAAG GAAGGTCAGG ACACGGAGTG CTTCGTGACC
TTGCAGAAGC CCTACCGGAC GTCGGAGCTG ATCGAGAAGC TGGCGGGGCT GGTGGCACCC
AAGGCGGAGG CCGCGATCCC GGCCTAG
 
Protein sequence
MSEDRAPALP GPDPAGGPAA DLPPIRVKIL IVDDDRRNLL AVSEILDEPG LDLVLAESGE 
DALRHTLRDD FALILLDVQM PRMDGYEVAS LIRSRSRSSR VPILFLTAYN REEMHVFRGY
SAGAVDYVFK PIQPLVLKSK VSVFVDLHRK TEEIKLKASA EKKLLLENLR VRGEKLEAER
ALRRRDAHQA AVLRGLPIAL YTASHQGDHR RLRFTNESVE RVSGFGAEAF ADPGLWLSRL
NPEDRDRVLD ALRAVGRTGA ATLEYRWRHA DGSERHILDQ VVANRGEEAA PGEVFGMWFD
ITERKEMELS LVHASKLEAV GRLTGGVAHD FNNMLSIVIG NLDLLQKSLV ADEKAHQRVQ
NAIDGAQRCA ELTSRLLAVS RRSPLQPAPL DLGSFMPGLV QLLRRTLGER IGVTLDLGDA
PPAVSVDRSQ LEAALINLAV NARDAMPEGG HLSIAVRRAG EADRAGRAAD AVLISVADTG
TGMPASVLAR VFEPFFTTKA EGKGTGLGLS MVHGFLQQSG GHIDVESVPG QGTTFTMSLP
ILAEAGPGTP AAPGAAPPDE VSGEGRTVLV VEDDSEVRQV AKAALKTLGF HVEEAGNGDE
AVAMLEENSD VALVLSDVNM PGTISGIELG RIVRQRWPNI GIVLASGYLK EGQDTECFVT
LQKPYRTSEL IEKLAGLVAP KAEAAIPA