Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6367 |
Symbol | |
ID | 6130389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 6995805 |
End bp | 6997214 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641646461 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001773065 |
Protein GI | 170744410 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.129788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.347421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGAA AACCCCCTTC CCGCGGCGGA CGCGCGCGCG CCGATGCCGG GCGCCCGAAG CCCGGGCGCC CGCCCGCGCG GGCGCGCACC GGGCCGCGCA ACACCGCCCG CGACGCCGCC GAACGCGCCG CCGGCGGCCG AGACCTCGGC GATGCCGCCC CCTGGGACCA GGGCGAGGCG ATCCCGGCGG CCAAGTCTCC GGCGGCCAAG TCTCCGGCGG CCAAGTCTTC GGCGGCCAAG TCTCCGGCGG CCAAGACTTC GGCGGCCAGG TCTTCGGCGG CCAAGACTTC GGCGACCAAG CCCCCGCGCC CGCCCCGGGC TCCCCGCGCG GCCGCGCCGC CGGCCCGGCC GCCGCGGCCC GCCGCCCCCG CCCCGACCCG CCGGGAGACC CGCGAGGCGA CCGCCGCCGC CCTCGCCACC GGCGTGCAGA CCCTGGAGGT GACGCCCGAC GAGGCCGGGA TGCGCATCGA CCGCTTCCTG TCGGCGCGCT TCCCGCAGCT GCCCTTCACC CGCATCCAGA GCCTCGTGCG CAAGGGCGAA TTGCGGGTCA ACGGCAAGCG CGCGAAGGCC GCCGACCGGG TCGAGCCGGG GGCGAGCGTG CGGGTGCCGC CGCTCAAGCT CGACGCGGCC AAGCCCGGCC CGAGCCCGGC CCGGGCCGAG AGCGACCTCG CCTATCTGCG CTCCCTGGTG CTCTACGAGG ACCAGGACAT GATGGTGCTC AACAAGCCCT ACGGCCTCGC GGTGCAGGGC GGCTCGGGCA CCAAGCGCCA CGTGGACGGC CTGCTGGAGG CCCTGCGCGC GCCGGACGGG CAGAAGCCGC GCCTCGTCCA CCGCCTCGAC AAGGACACGG CCGGCTGCCT CGTCATCGCC AAGACCCGGC TCGCCGCCGC GACGCTCGCC AAAACCTTCC GGTCGCGTGC GGCGCGCAAG ATCTACTGGG CGCTCGCCGC GGGCGTGCCG AAGGTCCGCC AGGGCCGCGT CTCGACCTAC CTCGCCAAGG AGGAGGTCGG CGAGGCCGAT GCGCGCATGC GCGTCGCCCA GCACGGGGAC GAGGGGGCGA GCCACGCGCT GACCTATTAC GCGGTGGTCG ACCAGGCCGG GCAGAAGCTC TCCTGGCTGT CGCTGAAGCC GGTGACCGGG CGCACCCACC AGCTGCGGGC CCACGCCGCC CATATCGGCC ACCCGCTGGT CGGCGACCCG AAATACTTCG ACATCGAGAA TTGGGAATTG CCCGGGGGCC TGCAGAACCG CCTGCACCTG CTGGCGCGCC GCATCGTCAT CCCGCATCCC CGCACCAACA AGCCGGTCGA CGTCACCGCG CCGCTGCCGC CGCACATGGC CCAGAGCTGG AACCTGCTCG GCTTCGACGC GGGCCGCTAC GACCCGATCG TGGAGGCGCC CGAGGGCTGA
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Protein sequence | MTGKPPSRGG RARADAGRPK PGRPPARART GPRNTARDAA ERAAGGRDLG DAAPWDQGEA IPAAKSPAAK SPAAKSSAAK SPAAKTSAAR SSAAKTSATK PPRPPRAPRA AAPPARPPRP AAPAPTRRET REATAAALAT GVQTLEVTPD EAGMRIDRFL SARFPQLPFT RIQSLVRKGE LRVNGKRAKA ADRVEPGASV RVPPLKLDAA KPGPSPARAE SDLAYLRSLV LYEDQDMMVL NKPYGLAVQG GSGTKRHVDG LLEALRAPDG QKPRLVHRLD KDTAGCLVIA KTRLAAATLA KTFRSRAARK IYWALAAGVP KVRQGRVSTY LAKEEVGEAD ARMRVAQHGD EGASHALTYY AVVDQAGQKL SWLSLKPVTG RTHQLRAHAA HIGHPLVGDP KYFDIENWEL PGGLQNRLHL LARRIVIPHP RTNKPVDVTA PLPPHMAQSW NLLGFDAGRY DPIVEAPEG
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