Gene M446_6320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6320 
Symbol 
ID6129789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp6945514 
End bp6946173 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content71% 
IMG OID641646415 
ProductGTP cyclohydrolase I 
Protein accessionYP_001773019 
Protein GI170744364 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0252905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.00245431 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGCGG TGCTGAAGTC CTTGTCGGTC CGCCTGCCGG ACGCCGCCGA CAAGCGCAGC 
GACACGGGCC GCCCCGAGCG CGTGACCGAG CGGCCGACCC GGCAGGAGGC CGAGGCGGCG 
GTGCGCACCC TGATCCGCTG GGCCGGCGAC GATCCCGAGC GCGAGGGCCT GCGCGAGACG 
CCCCAGCGCG TCGCCCGCGC CTACGAGCAG ATCTTCGGCG GCTACCGCCA GGAGCCGACC 
CACATCCTCG ACCGCGTCTT CGAGGAGGTC GAGGGCTACG GCGACATCGT GCTGGTGCGC 
GACATCCCGT TCCACTCCCA TTGCGAGCAC CACATGGTGC CGTTCATCGG CCGGGCGCAC 
ATCGCCTATT ACCCGCGCCG GGGCGTGGTC GGGCTCTCGA AGCTCGCCCG GGTGGTCGAT 
GCCTTCGCGC GCCGGCTGCA GACCCAGGAG ACGATGACGG CCCAGATCGC CGACACGATC 
GACGCGGTGC TCAATCCCCG CGGGGTCGCC GTGATGGTCG AGGCCGAGCA CCTCTGCATG 
GCGATGCGCG GGGTGCAGAA GGCGGGCGTC TCGACGCTCA CCACCCAGTT CACCGGCGTG 
TTCAAGCAGG ACCCGCACGA GCAGGTCCGC TTCCTCACCC TCGTGCGCGA CCAGCGCTGA
 
Protein sequence
MDAVLKSLSV RLPDAADKRS DTGRPERVTE RPTRQEAEAA VRTLIRWAGD DPEREGLRET 
PQRVARAYEQ IFGGYRQEPT HILDRVFEEV EGYGDIVLVR DIPFHSHCEH HMVPFIGRAH 
IAYYPRRGVV GLSKLARVVD AFARRLQTQE TMTAQIADTI DAVLNPRGVA VMVEAEHLCM 
AMRGVQKAGV STLTTQFTGV FKQDPHEQVR FLTLVRDQR