| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6308 |
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| Symbol | |
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| ID | 6135455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 6930628 |
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| End bp | 6934239 |
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| Gene Length | 3612 bp |
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| Protein Length | 1203 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641646404 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001773008 |
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| Protein GI | 170744353 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0152711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAG CCGATCCCAA CCCGCCTTCC AAGCCGCCTT CCAAGCCGCC GGTCGCCCGG
TTCGCGCTTC CCAAATCCGC CGCCCTCACC CGGGCCGTCG AGGCGCTGCG GCGGGGCGAC
AGCCCCACCC TCGCCCGGGT CCCGGACGGG TTCGACGCCC TGGTCGTGGC CGACCTCGCG
CGGGTGCTCG GCCAAGATCC GCAGAGCCGG GCCTCGCAGG GCCCGGCCGC GCTCGTCCAC
GTCGCCCGGG ACGGCACCCG CTCGGCGGCC TTCGCGGGCG CGCTCGCCTT CGTGGCGCCC
GAGATCGAGG TGCTGAGCAT CCCGGCCTGG GATTGCCAGC CCTACGACCG GGTCTCGCCG
AACCCGGCCA TCGCGGCCGA GCGGATGACG GCCCTGTCGC GGCTGGCCCG CACGCGCAGC
TCCGAGGAGC GCCCGCGCGT CGTCGTGACC ACGGTCAACG CCCTGGTGCA GCGGGTGCCG
GCCCGCGACC GCATCGCGGT CGAGACCTTC TCGGCGGCGG TCGGCAACGC GGTCGACACC
GACAAGATCG TGGCCTGGCT CGAAGCCAAC GGCTTCCTGC GCACCGGCAC CGTGCGCGAC
ACCGGCGAGT ACGCGGTGCG CGGGGGCATC ATCGACCTCT CGCCGCCGGG CCTGCCCAAC
CCGGTCCGCC TCGACTTCTT CGGCGACACG CTCGAATCGA TCCGCAGCTT CGATCCCGAG
ACCCAGCGCA CGATCGGGCA GCTGCGCTCC CTCGACCTCG TTCCGATGAG CGAGGTGCAG
CTCACCACCG AGACGATCCG GCGCTTCCGC CAGGGCTACG TCGCGGCCTT CGGGGCGGCG
ACCCGCGACG ACCGGCTCTA CGAGGCGGTG AGCGAGGGGC GGCGCGCGGC CGGGCTCGAG
CACTGGATGC CGCTCTTCTA CGACCGGCTC GACACGCTGT TCGACTACCT GGCGGGCGTG
CCCCTGGTCT TCGACAAGGA CGTGGACGAC GCGGCGGGCG AGCGGCTCGG CCAGGTCCAG
GAGTATCACG ACGCCCGCTG CGAGGCGCTG AAGGCGCCGC AGCCCGGCGT CGCGCCGTAC
AAGCCGCTCG GGTCCGACGC GCTCTACCTC TCGCCGGCCG AGTGGGCGAA GCGGGTCGAG
GGCGCCCGCG TCGCCCGCCT CACCCCCTTC GCGGTGCCGG AGAGCCCCGG GCGCCCGATC
GTCGATTGCG AGGCCGAGCC CGCCCGCAAC TTCGCGCCCG AGCGGGCGCA GGAGGGCGTC
AACGTCTTCG ACGCGGCGGT GCAGCACGTG CGCGCCCTGC AGGGCTCGGG CCACCACGTC
ATCCTGGCGG CGTGGTCGGA GGGCTCGCGC GACCGGCTCT GCGGCGTGCT GACCGATCAC
GGCCTGCCCA AGCCGAAGAC CGTCACCCGC CTGTCGGACA CGCTGGCATT GAAGCGCGGT
CAGGACGTGG CGGTGGCGGT CTGGGGGCTG GAGGCGGGCT TCACCATCGA GCGCCTCGCG
GTCGTCGCCG AGGGCGACAT CCTGGGCGAC CGGCTGGTGC GGCCCAAGCG CAAGGCCAAG
CGCCCCCAGG ACGTGATCCT GGAGGTGCAG GCGCTGAGCC CCGGCGACCT CGTGGTCCAC
GCGGATCACG GGATCGGCCG CTTCACCGGG CTCAAGACCG TGACGGCGGC GGGCGCGCCG
CACGATTGCC TGGAGATCCA GTACAATGGC GGCCTGCTGC TGCTGCCGGT CGAGAACATC
GAGCTCCTGA CCCGCTACGG CTCGGAGGAG GCCGACGTCC CCCTCGACAA GCTCGGCGGC
GGGGCGTGGC AGGCGCGCAA GGCGAAGCTG AAGCGCCGCA TCCTGGAAAT GGCGGGCGCG
CTCATCAAGG TGGCGGCCGA GCGCTTCCTG CGCCCCGCCC CGAAGCTGGT GCCGCCGGAC
GGCACCTACG GCGAGTTCGC GGCCCGCTTC CCCTACGAGG AGACGGAGGA CCAGGAGGCG
GCGATCGCCG CGACCCTCGG CGACCTCACG GCCGGGCGGC CGATGGACCG GCTGATCTGC
GGCGATGTCG GCTTCGGCAA GACCGAGGTG GCGCTGCGCG CCGCCTTCGT GGCGGCGATC
TCGGGCAGGC AGGTCGCCGT GGTGGTGCCC ACCACCCTGC TCGCCCGCCA GCACTACCGC
ACCTTCGCGG AGCGCTTCAA AGGCCTGCCG GTGAACGTCG CCCAGGCCAG CCGCTTCGTG
TCGAGCGCGG AGCTGAAGCG GGTGCGGGAG GGGCTCGCGG ACGGCACGGT CGACATCGTG
GTCGGCACCC ACGCCCTGCT CGCCAAGACG ATCGGGTTCC GGGACCTCGG CCTGATCATC
ATCGACGAGG AGCAGCATTT CGGCGTCGCC CACAAGGAGC GCCTCAAGGC CCTGCGCGCC
GAGGTGCACG TGCTCACCCT CTCGGCGACG CCGATCCCGC GCACGCTGCA GCTCGCCATG
ACGGGGGTGC GCGAACTCTC GATCATCGCG ACGCCGCCGG TGGACCGGCT GGCGGTGCGC
ACCTTCGTGA CGCCCTTCGA CCCGCTGCTC GTCCGCGAGG CGCTGCTGCG CGAGCGCTAC
CGGGGCGGCC AGGCCTTCTA CGTGGTGCCG CGGATCGAGC ACCTCGACGA GGTCAAGCGC
TTCCTCGACC GGGAGATGCC GGAGGCCAAG GTCGGGATCG CGCACGGGCA GATGCCGGCC
GGCCAGCTCG AGGACGTGAT GACGGCCTTC TACGAGGGCA AGTTCGACAT CCTGCTCTCG
ACCACCATCG TCGAATCGGG CCTGGACATC CCGACCGCCA ACACCCTGAT CGTGCACCGG
GCCGACATGT TCGGCCTCGC CCAGCTCTAC CAGCTGCGCG GCCGGGTCGG CCGCTCGAAG
GCCCGCGCCT ACGCGCTCTT CACCACGCCC GAGGGCAAGG CCCTGACGGT GCAGGCCGAG
CGGCGGCTCA AGGTGCTGCA ATCCCTCGAC ACGCTGGGGG CGGGCTTCCA GCTCGCCAGC
CACGACCTCG ACATCCGCGG CGCCGGCAAC CTGCTCGGCG ACGAGCAATC CGGCCACATC
AAGGAGGTCG GCTACGAACT CTACCAGCAG ATGCTGGAGG ACGCGGTCGC GGCCCTCAAG
GAGGGCAAGG CGGTGCCGGC CGACGAGCAA TGGTCGCCCA CCATCGCGCT CGGCGCCCCG
GTCACCATGC CGGAGGAGTA CGTCTCCGAC CTGTCGGTGC GGCTCGGCCT CTACCGGCGC
CTCGCCACCC TCGACAGCGA CGCGGAGCTG GAGAGCTTCG GGGCCGAGCT GATCGACCGC
TTCGGCCCGC TCCCGCCCGA GGTGGAGCAG CTCCTCAAGA TCGTCACGAT CAAGATCCTG
TGCCGGGAGA CCAACGTCGA GAAGGTGGAG GCCGGGCCGA AGGGGATCGT GTTCCACTTC
CGCGACCGCG CCTTCGCCAA TCCGGCGCGG CTCGCCGCCT ACATCGCCGA GCAGCGCTCC
TTCGCGAAGG TCCGTCCGGA CATGAGCGTG GTGTTCATCC GCAACCTCGA CACGGTGGCC
GAGCGGCTGA AGGAGACGAC CGCCATCCTG CGCGACCTCA CCAAGCTGAC GAGCCGCCGC
AAGGCGGCCT GA
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| Protein sequence | MAKADPNPPS KPPSKPPVAR FALPKSAALT RAVEALRRGD SPTLARVPDG FDALVVADLA
RVLGQDPQSR ASQGPAALVH VARDGTRSAA FAGALAFVAP EIEVLSIPAW DCQPYDRVSP
NPAIAAERMT ALSRLARTRS SEERPRVVVT TVNALVQRVP ARDRIAVETF SAAVGNAVDT
DKIVAWLEAN GFLRTGTVRD TGEYAVRGGI IDLSPPGLPN PVRLDFFGDT LESIRSFDPE
TQRTIGQLRS LDLVPMSEVQ LTTETIRRFR QGYVAAFGAA TRDDRLYEAV SEGRRAAGLE
HWMPLFYDRL DTLFDYLAGV PLVFDKDVDD AAGERLGQVQ EYHDARCEAL KAPQPGVAPY
KPLGSDALYL SPAEWAKRVE GARVARLTPF AVPESPGRPI VDCEAEPARN FAPERAQEGV
NVFDAAVQHV RALQGSGHHV ILAAWSEGSR DRLCGVLTDH GLPKPKTVTR LSDTLALKRG
QDVAVAVWGL EAGFTIERLA VVAEGDILGD RLVRPKRKAK RPQDVILEVQ ALSPGDLVVH
ADHGIGRFTG LKTVTAAGAP HDCLEIQYNG GLLLLPVENI ELLTRYGSEE ADVPLDKLGG
GAWQARKAKL KRRILEMAGA LIKVAAERFL RPAPKLVPPD GTYGEFAARF PYEETEDQEA
AIAATLGDLT AGRPMDRLIC GDVGFGKTEV ALRAAFVAAI SGRQVAVVVP TTLLARQHYR
TFAERFKGLP VNVAQASRFV SSAELKRVRE GLADGTVDIV VGTHALLAKT IGFRDLGLII
IDEEQHFGVA HKERLKALRA EVHVLTLSAT PIPRTLQLAM TGVRELSIIA TPPVDRLAVR
TFVTPFDPLL VREALLRERY RGGQAFYVVP RIEHLDEVKR FLDREMPEAK VGIAHGQMPA
GQLEDVMTAF YEGKFDILLS TTIVESGLDI PTANTLIVHR ADMFGLAQLY QLRGRVGRSK
ARAYALFTTP EGKALTVQAE RRLKVLQSLD TLGAGFQLAS HDLDIRGAGN LLGDEQSGHI
KEVGYELYQQ MLEDAVAALK EGKAVPADEQ WSPTIALGAP VTMPEEYVSD LSVRLGLYRR
LATLDSDAEL ESFGAELIDR FGPLPPEVEQ LLKIVTIKIL CRETNVEKVE AGPKGIVFHF
RDRAFANPAR LAAYIAEQRS FAKVRPDMSV VFIRNLDTVA ERLKETTAIL RDLTKLTSRR
KAA
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