| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6204 |
|---|
| Symbol | |
|---|
| ID | 6129866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 6821525 |
|---|
| End bp | 6822880 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641646301 |
|---|
| Product | glucarate dehydratase |
|---|
| Protein accession | YP_001772906 |
|---|
| Protein GI | 170744251 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.254671 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACCG CCGCCGGCCC CGCGCAGGGC CTCTCGCGCA CGCCGACCAT CGCCGCCATG
CGGGTCGTCC CGGTGGCCGG CCGCGACAGC ATGCTGCTCA ACCTGTCGGG CGCGCACGGG
CCGTTCTTCA CCCGCAACCT CGTGGTGCTG ACCGACTCGA CCGGCGCCAC CGGCCTCGGC
GAGGTGCCGG GAGGCGAGCG CATCCGGCAG ACCCTGGAGG ATGCGCGCGG CCTCGTCCTC
GGCCAGCCCC TCGGCGCCTG GAACCGCGTG CTCGCCGCCA TGCGGGCGCG CTTCGCCGAT
CGCGACGCGG GGGGGCGGGG TCTCCAGACC TTCGACCTGC GCGTCGCCAT CCACGCGGTC
ACGGCGGTGG AATCCGCCTT CCTCGACCTG CTCGGCCAGT TCCTCGGCGT GCCGGTGGCG
GCCCTCCTCG GCGAGGGCCA GCAGCGCGAC GCGGTCGAGA TGCTGGGCTA CCTGTTCTAC
GTCGGCGACC GCCGCCGCAC GAATCTGGCC TACCGGGAGC CCGAGGCGCG CGACGGCTGG
CTGCGGCTGC GCGACGAGGA GGCGCTGACG CCCGATGCCG TGGTGCGGCT CGCCGAGGCC
GCGCACGAGC GCTACGGCTT CAACGATTTC AAGCTCAAGG GCGGGGTGCT GGCGGGCGAG
CGGGAGATCG AGGCGGTGAC CGCCCTCGCC AAGCGCTTCC CGCAGGCCCG CGTCACCCTC
GACCCGAACG GGGCGTGGTC GCTCGAGGAG GCGATCCGCC TGTGCAGGGG CCGGGGCGAC
GTGCTCGCCT ACGCGGAGGA TCCCTGCGGG GCCGAGAACG GCTTCTCCGG CCGCGAGGTC
ATGGCCGAGT TCCGCCGCGC CACCGGGCTG CCCACCGCCA CCAACATGAT CGCGACCGAC
TGGCGCCAGA TGGTGCACGC GCTCCAGCTC GGCGCCGTCG ACATTCCCCT GGCCGACCCG
CATTTCTGGA CGCTGGCCGG GGCGGTGCGC GTCGCCCAGA CCTGCCGCGA CCACGGCCTC
ACCTGGGGCT CGCACTCGAA CAACCACTTC GATGTGTCGC TGGCCATGTT CACCCACGCC
GCCGCGGCCG CGCCCGGCAA GGTCACGGCG ATCGACACGC ACTGGATCTG GCAGGACGGC
CAGCGCCTGA CCCGGGAGCC GCCGGAGATC CGCGGCGGCC TGGTGCGGGT GCCGGAGCGG
CCGGGCCTCG GCGTCGCGCT CGACTGGGAG GCGGTCGAGG CGGCCCACGC CCTCTACGAG
CGCCACGGGC TCGGCGCCCG CGACGACGCC GCGGCGATGC AGTTCCTGAT TCCCGGCTGG
ACCTTCGATC CCAAGACACC CTGCCTCGTG CGCTGA
|
|---|
| Protein sequence | METAAGPAQG LSRTPTIAAM RVVPVAGRDS MLLNLSGAHG PFFTRNLVVL TDSTGATGLG
EVPGGERIRQ TLEDARGLVL GQPLGAWNRV LAAMRARFAD RDAGGRGLQT FDLRVAIHAV
TAVESAFLDL LGQFLGVPVA ALLGEGQQRD AVEMLGYLFY VGDRRRTNLA YREPEARDGW
LRLRDEEALT PDAVVRLAEA AHERYGFNDF KLKGGVLAGE REIEAVTALA KRFPQARVTL
DPNGAWSLEE AIRLCRGRGD VLAYAEDPCG AENGFSGREV MAEFRRATGL PTATNMIATD
WRQMVHALQL GAVDIPLADP HFWTLAGAVR VAQTCRDHGL TWGSHSNNHF DVSLAMFTHA
AAAAPGKVTA IDTHWIWQDG QRLTREPPEI RGGLVRVPER PGLGVALDWE AVEAAHALYE
RHGLGARDDA AAMQFLIPGW TFDPKTPCLV R
|
|---|
| |