| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6199 |
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| Symbol | |
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| ID | 6130019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 6811529 |
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| End bp | 6813751 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641646290 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001772901 |
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| Protein GI | 170744246 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGAAGA TGGTCGATTC GTTTGCCCGC GCGGACGGCG CCTCGCCCGG CGAGGACATG
CCCGCGGAGG AGAGGCGCCT GCGGGAACTC GCGGCCTACC GGATCGCCGA CAGCGCGCCC
GAACCGGAGA TCGACCGCAT CGCCTCCCTG GCCGCCGCCC TGTTCGGGAC GCCCTGGGCC
GCCGTGACGC TGATCGGCGA GGACACGCAG TGGCTCAAGG CGCGCCACGG CCTCGACCTG
CCGCGGACGC CCCGATCGGT CTCCTTCTGC ACGCACACGA TCGAGAGCGA CGAGGTCATG
GTGGTCCCGG ATGCCAGCCG GGACCCGCGC TTCCGCGACA ATCCGCTGGT GCGGGGCGAC
CTCGCCCTGC GCTTCTACGC GGGCGCGCCC CTGGTCACGC CGAGCGGGGC GCGCATCGGG
GCGATCTGCG TCCTCGACCA TGCCCCGCGC CCCGCCCTCG ACGCGGCCGG GCGGGGGCGC
CTCGCCGACC TCGCGCGCCT GATGATGACC CAGCTCGACC TGCGGCGCCA GGGCCGGCGC
GACGCGGAGA TCACGCGCTT CGCGGCCGCC ACGGAACTCG CGCTCCTCTC CGTCGATCCG
GACGGCCGCA TCGGCTTCGC CAACCAGGCG AGCGAGCGCC TCTTCGGCTA CGGGCCGGGC
GACCTCGTCG GGCTGCCGGT CGAGGTCATC GTGCCGCAGC GCGCCCGGGC CCGCCACCGC
GAAGGCATGG CCCGCGTCCT CGGGGAGGGC GGGACGCGCC TCGCCGGCCG GACCGTGCAA
TTCACCGGCC TGCGCCGGGA CGGCAGCGAG GTGGCGGTCG AACTCACGCT CTCGGTCTGG
ACCGGCGCCG AGGGGATGTG CATGGGGGCG GTGATCCGGG ACGTCGCGGA GGGCGACGGG
CGGCTCCTCA ACCTCGCCGA CCGCGACCCC GTCACCGGCC TGCCGAACCG GCGCCACCTC
ACCGAGATCC TGGCCGCCCG CCTGGTCGCC GGGCCGGTCG CCGCGCTGCT GCTGCACCTC
GAGGGGCTCA AGGAAGCCTC GGAGGAGCTC GGGCACGGGC TCGGGGACGC CCTGGCCCAG
GCCGCGACGA TCCGGCTCCT CGCGGCCCTC GACGGCGACG CCACCGCGGC GCGCTGGGAC
GGGGACCGCA TGGCCGTCCT GGTGCCCGAT CCGGAGCCCG CCGGGCTCCT CGCCCGGGCC
GCGACGCTGC AGGACGCCTT CGCGGGGGCC TTCGAGGTCA GCGGGCGCAC CGTGCATCTC
GGCCTGAGCC TCGGCATCGC CGTGGCGCCG CGGCACGGCG AGCGGGCCGA GGAACTCTTG
GCCAATGCCG ACCTCGCGCT CAGCCGCGCC CGGCACGGGG ACGGGCGCGG GGTGCGCGTC
TACGATCCGG CCATGCGCGC CGAGATCGAG TCGCGCCGCG CCCTCCAGAA CGACCTGCGC
CGCGCCCTGG AGCGGGGCGA ACTCGTCCTG CACTACCAGC CGCAGGTGCT CCTGCGCAGC
GGCGGCATCG TGGGCGCCGA GGCGCTGGTA CGCTGGCAGC ACCCGGAGCG GGGGCTGCTC
TACCCAGGCG ACTTCCTGCA CGCGGTCGAG TCGAGCACGC TCGCCCTCCA TCTCGGCTGG
TGGACGGTGG ACGAGGTCTG CCGGCAGATC GCCGCCTGGC GCGCCGCCGG CCTGCCCCCG
GTGCGCATCG CCCTGAACCT CTACGCGGCC CAGTTCCGCG CCGGCACCCT CGGGCAGGTG
GTCGAGGAGG CGCTCGCCCG CCACGGCGTC CCGCCCACCC TGCTCGAACT GGAGGTGACC
GAAACCATCG CGCTCCAGAA CGACGGGGCC GACCTCGAGC CGATCCGCGC CCTGCGGGAG
CGCGGGGTCG GCATCGCCTT CGACGATTTC GGCACCGGCT ACGCCGCGCT CAGCACCCTC
AAGCGCTTCC CCCTGAGCAA GCTGAAGATC GACCGCGGCT TCGTGCGCGA CATCCTCTCC
GAGCCCCACG ACGAGGCGAT CGTCGGGGCC GTGCTGTCGA TCGGCCGCCG CCTCGCCCTC
GACGTGGTGG CGGAGGGGAT CGAGACCCGG GACCACGTCG CGGCCCTGCT GCGGCTCGGA
TGCGAGTTCG GCCAGGGCTA CCTGTTCGGG CGCGCCATGC CCCCCGCCGC CTTCGCCGAG
CGCCTCGGCG CCGAGGCCGC GTCCCGCGAG GCCCTCACCC TCCTGCGCGT CGCCAGGGCC
TGA
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| Protein sequence | MGKMVDSFAR ADGASPGEDM PAEERRLREL AAYRIADSAP EPEIDRIASL AAALFGTPWA
AVTLIGEDTQ WLKARHGLDL PRTPRSVSFC THTIESDEVM VVPDASRDPR FRDNPLVRGD
LALRFYAGAP LVTPSGARIG AICVLDHAPR PALDAAGRGR LADLARLMMT QLDLRRQGRR
DAEITRFAAA TELALLSVDP DGRIGFANQA SERLFGYGPG DLVGLPVEVI VPQRARARHR
EGMARVLGEG GTRLAGRTVQ FTGLRRDGSE VAVELTLSVW TGAEGMCMGA VIRDVAEGDG
RLLNLADRDP VTGLPNRRHL TEILAARLVA GPVAALLLHL EGLKEASEEL GHGLGDALAQ
AATIRLLAAL DGDATAARWD GDRMAVLVPD PEPAGLLARA ATLQDAFAGA FEVSGRTVHL
GLSLGIAVAP RHGERAEELL ANADLALSRA RHGDGRGVRV YDPAMRAEIE SRRALQNDLR
RALERGELVL HYQPQVLLRS GGIVGAEALV RWQHPERGLL YPGDFLHAVE SSTLALHLGW
WTVDEVCRQI AAWRAAGLPP VRIALNLYAA QFRAGTLGQV VEEALARHGV PPTLLELEVT
ETIALQNDGA DLEPIRALRE RGVGIAFDDF GTGYAALSTL KRFPLSKLKI DRGFVRDILS
EPHDEAIVGA VLSIGRRLAL DVVAEGIETR DHVAALLRLG CEFGQGYLFG RAMPPAAFAE
RLGAEAASRE ALTLLRVARA
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