| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6122 |
|---|
| Symbol | |
|---|
| ID | 6133720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 6737391 |
|---|
| End bp | 6738233 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641646220 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001772832 |
|---|
| Protein GI | 170744177 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0193396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC TCACATCCAG GAACGAGCCG GCGAAGGATC GGGTGTCGAT CCGCCGTCCT
CCCAATCATC GGGGGCTGGA AACACTCGCC GCGCACTACG TGCGTCAATC CTTCAAGCCG
CATGCCCACG ACGAGTTCGT GATCGGGATC ATCGAGGTCG GCGCGCACGC GGTCTGGTGC
CGCGGGGAGC AGCATCGCGT CGGCGGCGGC ACCGTCGTGA CCATGCATCC CGGCGAGGTC
CATCACGGCG GCGCCGCGGT CGCCGAGGGC TGGGTCCAGC GCATGCTCTA CGTCAGCGAG
GACCTGATGA GCCAGCTGAT CCGCGAGGCC ACCGACCGCC CGCGGGTCAA GCCCGACTTC
AAGACCACCT TCCATCTGCG GCCCGATCTC GCGACCTGCT TCAGCCATTT CCACCAAGTG
CTGCACTTCT CGACCCTGAC CCTGGCGCGC GACGTCGCGC TCGACGCGAT CATCCGCCTG
CTCGTCGAGA TCATCTGCCC GACCTTCAAC GCGGAGGGCG GGGCGCGGCC GCCGGACGGC
CGGATCGCCA GCGCCGTGGA GTTCCTGGAG GCGCATGCCT GCGACAACGT CACGATCGAC
GACCTCTGCG CGGTCTCGGG CCTGCGGCGC CGGCAGACGA TCGAGGCGTT CAAGCGCTGC
ACCGGCCTTC CGCCCCACGC CTACCACGTC GTCCTCAAGG TGAAGGCGGT GAAGGCCATG
CTGCGCGCCG GCCTCTCGGC CGCGGAGGCC GCCGCGCAGG CGGGATTCGC GGATCAGAGC
CACATGACGC GCCACTTCGT GTCGATCGTC GGGATGACGC CGGGCGCCTA CGCCCAGGGC
TGA
|
|---|
| Protein sequence | MIDLTSRNEP AKDRVSIRRP PNHRGLETLA AHYVRQSFKP HAHDEFVIGI IEVGAHAVWC
RGEQHRVGGG TVVTMHPGEV HHGGAAVAEG WVQRMLYVSE DLMSQLIREA TDRPRVKPDF
KTTFHLRPDL ATCFSHFHQV LHFSTLTLAR DVALDAIIRL LVEIICPTFN AEGGARPPDG
RIASAVEFLE AHACDNVTID DLCAVSGLRR RQTIEAFKRC TGLPPHAYHV VLKVKAVKAM
LRAGLSAAEA AAQAGFADQS HMTRHFVSIV GMTPGAYAQG
|
|---|
| |