| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6080 |
|---|
| Symbol | |
|---|
| ID | 6133086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 6678903 |
|---|
| End bp | 6680486 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641646178 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001772790 |
|---|
| Protein GI | 170744135 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0853304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00330735 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA TTTACATCGT CAATCCGGCC AATTCCGCAC CGAGCTATCA CACGGCCGAG
TTCTTCGGCG ACGAGGCCCG CGGCTGGGTG CAGGTCGCCG ACCTCACGGT GGTGACGCTC
GCCGCGCTCG TGCCGGCCGA CTGGCACATC CGGATCACCG ACGAGAGCAT CGATGCCGTC
GATCTCGACG CGCAGGTCGA CGTCGTCGCG ATCACCGGCA AGGTGTCCCA GCGTGACAGG
ATGATCGCAC TCGCCGACGC CTTCCGCCGG CGCGGCCGGA CGGTGATGAT CGGGGGGTCG
TTCGCGACCC TGACTCCGGA GGAGATGCGG CCGCACGCCG ACATCCTGGT GACGGGCGAG
GTCGAGGAGA TCGCGGCGCA GATCTTCTCG GACATCGCGG CGGGACGCGC CGGCGACCGC
TACGACGGGG GCAAGGCCGA CATCCGCCGG TCCCCGGTCC CGCGCTGGGA CCTCTATCCC
GTCGAGCGCG CGTCGTCGGG CGCGCTTCAG ACCACGCGCG GCTGCCCCTT CAGCTGCGAA
TTCTGTGATG TCATCCAATA CCAGGGCCGC AAGCAGCGGC ACAAAGACAT TGCGCAGATC
GTTGCCGAAC TGGATGCGCT CTATGCGGCC GGCTTCCGGC AGATCTTCCT GGTCGACGAC
AATTTCACCG TCCACCGCGC CTGGGCCCGC AAGGTGCTCG ACGCTTTGAC CGCCTGGAAC
GCGGGGCACG AGGCCGATCC GGTCCTGTTC CTGACCCAGG CCTCGCTCGA CGTGGCGCGC
GACCCGGATC TTCTCGAGCG CTGCCACGAG GCCGGGATTC GGATCCTCTT CGTCGGCATC
GAGACCGTCA ACAAGGCGAG CCTTCGCGAG ACCGGAAAGA AGCAGAACCT CCTGCAGCCG
GTCGAGAGCG CGATCGCTGC GATCCTCCAG AAGGGGATCG CGGTTCAGGC GGGCATCATC
GTCGGCTTCG ACCACGACTC GGCCGGGATC TTCGACCAGA TGCGGGGGTT CTTCGATGCC
GCGCCGATCC CCGAACTCAA CATCGGCGTG CTCACCGCCC CTCACGCCAC CGACCTCTAT
CGCCGCCTCG CGCGCGAGGG GCGGCTGCTC GGCGCCTCCT GGGAAACGGC GGCGGCGAGT
CCGTTCTCGA CCAACATCGT GCCGGCCGGA ATGTCCCGTC GCGTCCTCCT CGACGGCGTC
GCGGACCTGT GCGCGGCGGC CTACATGCCG GAGGCGTTCG GGGCGCGGAT GCTGCGCATG
ATCGCGCAGC TCAGGAGCAC GGCCTACGCG CCGGTGCGCC GCCACGACGC GGGATCGGAG
CGAACCGCGA TGTTCTTCCG GATCATGAAG CGGGTCTCGG CGCTCGGACC GCGCGAGGCG
GAGATGGTGC GGGAGGTCGT GCGCGCGGCC GGCGCGAAGC CGTCGACGCT GAGACTCGTC
GTCCACTTCC TCAGCAAGTA CGGTCAGGTG CGCTATTTCC TGGACGGAGC GGGCGTGTTC
CGCGCCGATG CGTCAGCGCG GGCGCTGGTT GCGCCCGAGC GACAGGTGGC CGACGCCGCC
GCCCTGCAGC GGCAGTTCGC CTGA
|
|---|
| Protein sequence | MPAIYIVNPA NSAPSYHTAE FFGDEARGWV QVADLTVVTL AALVPADWHI RITDESIDAV
DLDAQVDVVA ITGKVSQRDR MIALADAFRR RGRTVMIGGS FATLTPEEMR PHADILVTGE
VEEIAAQIFS DIAAGRAGDR YDGGKADIRR SPVPRWDLYP VERASSGALQ TTRGCPFSCE
FCDVIQYQGR KQRHKDIAQI VAELDALYAA GFRQIFLVDD NFTVHRAWAR KVLDALTAWN
AGHEADPVLF LTQASLDVAR DPDLLERCHE AGIRILFVGI ETVNKASLRE TGKKQNLLQP
VESAIAAILQ KGIAVQAGII VGFDHDSAGI FDQMRGFFDA APIPELNIGV LTAPHATDLY
RRLAREGRLL GASWETAAAS PFSTNIVPAG MSRRVLLDGV ADLCAAAYMP EAFGARMLRM
IAQLRSTAYA PVRRHDAGSE RTAMFFRIMK RVSALGPREA EMVREVVRAA GAKPSTLRLV
VHFLSKYGQV RYFLDGAGVF RADASARALV APERQVADAA ALQRQFA
|
|---|
| |