| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6076 |
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| Symbol | rpsA |
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| ID | 6132566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 6673914 |
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| End bp | 6675623 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641646174 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001772786 |
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| Protein GI | 170744131 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00847969 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCAG GTTTGCAAGG CGCCGCGTCG AGCCGCGAGG ATTTCGCCGC CCTCCTCGAG
GAATCGTTCC GCCAGCACGA GATCACGGAA GGCTCCGTGG TCAAGGGCCG GGTCGTGGCG
ATCGAGAAGG ACGTCGCCGT CATCGACATC GGCGCCAAGA CCGAGGGGCG CGTCCCCCTC
AAGGAGTTCA CCGGCCCCGG CCGTGACCAG CCGATCAGCG TCGGCGACGA GGTCGAGGTC
TACGTCGACC GCATCGAGAA CGCGCTCGGC GAGGCGGTGA TCTCCCGCGA CAAGGCCCGC
CGCGAGGAGA GCTGGGTCAA GCTCGAGAAG GCGTTCGAGA ACAACGAGCG CGTCACCGGC
ACGATCTTCA ACCAGGTCAA GGGCGGCTAC ACGGTCGACC TCGACGGCGC CGTGGCCTTC
CTGCCGCGCT CGCAGGTGGA CATCCGCCCG GTCCGCGACG TCACCCCGCT GATGGGCACG
CCGCAGCCGT TCCAGATCCT CAAGATGGAC CGCCGCCGCG GCAACATCGT GGTGTCGCGC
CGCACGGTCC TGGAGGAGAG CCGCGCCGAG CAGCGCTCGG AGCTGGTGGC GAACCTCGAA
GAGGGTCAGG TCATCGACGG CGTGGTCAAG AACATCACCG AGTACGGTGC GTTCGTGGAC
CTCGGCGGCA TCGACGGCCT GCTGCACGTC ACCGACATGG CGTGGCGCCG CGTCAACCAC
CCGTCCGAGG TCGTCAACAT CGGCCAGACG GTCAAGGTCA AGATCATCAA GATCAACCAC
GAGACGCACC GCATCTCGCT CGGCATCAAG CAGCTGCTGG CCGATCCGTG GGAGGGCATC
GCCGCCCGCT ACCCGGTGAA CGCCAAGCTC AAGGGCCGCG TGACCAACAT CACCGATTAC
GGCGCCTTCG TGGAGCTGGA GCCGGGGATC GAGGGCCTGA TCCACGTCTC GGAGATGAGC
TGGACCAAGA AGAACGTCCA TCCGGGCAAG ATCGTCTCCA CCTCCCAGGA GGTCGAGGTG
CAGATCCTGG AGGTCGATCC GGTCAAGCGC CGCATCTCGC TCGGCCTCAA GCAGACCCTG
CAGAACCCCT GGGAGGCCTT CGCCGAGAAG CACCCGGTCG GGTCCGAGGT CGAGGGCGAG
GTCAAGAACA AGACCGAGTT CGGCCTGTTC ATCGGCCTCG AGGGCGACGT CGACGGCATG
GTCCACCTCT CGGACCTCGA CTGGAACCGT CCGGGCGAGC AGGTCATCGA CGAGTTCAAG
AAGGGCGACG TGGTGCGCGC CCAGGTTCTC GACGTCGACG TCGAGAAGGA GCGCATCTCG
CTCGGCATCA AGCAGCTCGC CGGCGACCCC TTCGCGGATG CGGGGGAGAT CCGCAAGGGT
CAGGTCGTCA CCTGCGAGGT GCTGGAGGTC AAGGATTCCG GCATCGAGGT GAAGATCGTC
GACACCGACC TGTCGACCTT CATCCGCCGG GCCGAGATCG CCCGCGACCG CGGCGACCAG
CGCCCCGAGC GCTTCGCGGC GGGCGAGAAG GTGGATGCCC GCGTCACGCA GTTCGACCGC
AAGGCGCGCC GCGTGCAGCT CTCCATCAAG GCCCTGGAGA TGGCCGAGGA GAAGGAGGCG
ATCGCCCAGT ACGGCTCGGC CGATTCGGGC GCCTCGCTCG GCGACATCCT CGGCGCGGCC
CTCAAGGCCC GCGCCGGCGA CAAGAAGTAG
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| Protein sequence | MSAGLQGAAS SREDFAALLE ESFRQHEITE GSVVKGRVVA IEKDVAVIDI GAKTEGRVPL
KEFTGPGRDQ PISVGDEVEV YVDRIENALG EAVISRDKAR REESWVKLEK AFENNERVTG
TIFNQVKGGY TVDLDGAVAF LPRSQVDIRP VRDVTPLMGT PQPFQILKMD RRRGNIVVSR
RTVLEESRAE QRSELVANLE EGQVIDGVVK NITEYGAFVD LGGIDGLLHV TDMAWRRVNH
PSEVVNIGQT VKVKIIKINH ETHRISLGIK QLLADPWEGI AARYPVNAKL KGRVTNITDY
GAFVELEPGI EGLIHVSEMS WTKKNVHPGK IVSTSQEVEV QILEVDPVKR RISLGLKQTL
QNPWEAFAEK HPVGSEVEGE VKNKTEFGLF IGLEGDVDGM VHLSDLDWNR PGEQVIDEFK
KGDVVRAQVL DVDVEKERIS LGIKQLAGDP FADAGEIRKG QVVTCEVLEV KDSGIEVKIV
DTDLSTFIRR AEIARDRGDQ RPERFAAGEK VDARVTQFDR KARRVQLSIK ALEMAEEKEA
IAQYGSADSG ASLGDILGAA LKARAGDKK
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