Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6055 |
Symbol | |
ID | 6129725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 6640694 |
End bp | 6642523 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 641646154 |
Product | RNA-binding S4 domain-containing protein |
Protein accession | YP_001772766 |
Protein GI | 170744111 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.228541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.392617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA GCAACGACGA CGAGCCCCGC GGGGAGAGGC GCCGCCGCGG GACGGCCGAG GCGTCCCCCG GCGCGGCCTC CCCCGCCCGC CCCGCGCCCT CCGAGACGGC CGAGCCCGAG CGCATCGCCA AGGTCATGGC CCGGGCGGGC GTCGCCTCGC GGCGGGACGC GGAGGCGATG ATCCTGGAGG GGCGCGTCAG CCTCAACGGC GAGACCCTGA CCACGCCCGC CGTGACGGTC GGGCCCGGCG ACCGCATCGT CGTCGACGGC GAGCCCCTGC CCGTCCGCGA GCGCACCCGG CTGTGGATCT TCCACAAGCC CCGCGGCGTG GTGACCACCG CCCGCGACCC CGAGGGGCGC CAGACCGTGT TCGACATCCT GCCCGAGGAC CTGCCGCGGG TGGTGGCGAT CGGCCGGCTC GACATCAATA CCGAGGGGCT GCTGCTCCTC ACCAATGATG GCGGTCTCGC CAAGGTGATC GCCCATCCGG AGACCGGCTG GCTGCGCCGC TACCGGGTGC GCGCCTACGG CGACGTCGAC CAGGCGGCCC TCGACCGCCT GCGCGGCGGC GTCACCATCG ACGGGATGGA ATACGGCCCC GTCGAGGCCA GCATCGACCG GCAGCAGGGC GACAACGTCT GGCTGACGCT CGGCCTGCGG GAGGGCAAGA ACCGCGAGGT GAAGCGGATT CTGGAGCATC TCGGCCTCTC GGTGAACCGG CTGATCCGGC TCTCCTTCGG CCCGTTCCAG CTCGGCGACC TGGAGGTCGG GCTCGTCGAG GAGGTGCGCA CCAAGGTGCT CAAGGAGCAG CTCGGCCGCT CCCTCGCCGA GCAGGCCGGC GTCGACTTCA CCAGCCCCGT GCGCGAGCCG ATCGCCCCGT TCGGGTCGCC CAAACCCCCG GCCCCGGCGG CCGGCAGGAC GGGCGCCCCG GGTCGCGACC GGCCCCGGGG CGAGCGCCCG GACCGCAGCG CGCGCCCGGA TCGCGGGGAG CGCCTCGACC GCGGCGAGCG TCCGGCCCGG CCGGGCCGCG ACCCGGCCCG GCCGCAATTC GCGCGCCCGC CCGCCCCCGG GGCGCGCCCG GAGCGGGACC GCAAACCCGC GACCGGGCCG GCCCTGCGCC GGGCGGTCTG GCACGACCCG GAGATCGAGG CCGCGGTCGA GGCGCGCCCG CGGCTGCGGC GGCGGACGAA CGATCCCAAG GAGGCCCGGG CCGCGGCGGC CGAGCGCCCG CGCGAGCGGG TCGGCGCGAT CGCGACGGGG GAGCGCCGCG TCGTGGTGGA GCGCCTCAAG GCGGAGCCCG CCCCCGAGCC GCGCCGCCCG CCCGAGGGCC GGCCCCGGCC GGAGGGCCGG CAGCGGCCGG AGGGCCGGCA GCGGCCGGAG GGCCGGCAGC GGCCGGAGGG CCGCCTAGAT CGCGAGCGGC CCGCCCGCGG CGACCGCCCG CCCCGCGCGG GCGAGGAGCG CCCCGCGCGG CGCCCGCGCC CGGAGGGGTC AGGGCGGCCC GAGGGCGGCG CGCGTCCGCG CCCCGAGGGC GGCGGCCGGC CCGGCTTCGG CAAGGGCGGA TTTGACAAGG GCGGCTTTGA CAAGGGCGGC TTCGGCAAGG GCGACTTCGG CAAGGGCGGC CCCGGCGCGG GCCGCGGCGG CCCCGGCTTC GGCAAGGGCG GTCCCGGAAA GGGCGGCTCC GGGTTTGCAA AGGGCGGCCC CGGCTTTGCA AAAGGCGGCT CGAAGGGCGG CCGGCCGGGT CGCGGCGGCG CGGCCCCGCG ACCCGGCGGA CCGGGCGGAC GACCGGGCGG CGGGCGGCCC GGCGAAGGGC GGCCGCCCCG CGGGCGCTGA
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Protein sequence | MSDSNDDEPR GERRRRGTAE ASPGAASPAR PAPSETAEPE RIAKVMARAG VASRRDAEAM ILEGRVSLNG ETLTTPAVTV GPGDRIVVDG EPLPVRERTR LWIFHKPRGV VTTARDPEGR QTVFDILPED LPRVVAIGRL DINTEGLLLL TNDGGLAKVI AHPETGWLRR YRVRAYGDVD QAALDRLRGG VTIDGMEYGP VEASIDRQQG DNVWLTLGLR EGKNREVKRI LEHLGLSVNR LIRLSFGPFQ LGDLEVGLVE EVRTKVLKEQ LGRSLAEQAG VDFTSPVREP IAPFGSPKPP APAAGRTGAP GRDRPRGERP DRSARPDRGE RLDRGERPAR PGRDPARPQF ARPPAPGARP ERDRKPATGP ALRRAVWHDP EIEAAVEARP RLRRRTNDPK EARAAAAERP RERVGAIATG ERRVVVERLK AEPAPEPRRP PEGRPRPEGR QRPEGRQRPE GRQRPEGRLD RERPARGDRP PRAGEERPAR RPRPEGSGRP EGGARPRPEG GGRPGFGKGG FDKGGFDKGG FGKGDFGKGG PGAGRGGPGF GKGGPGKGGS GFAKGGPGFA KGGSKGGRPG RGGAAPRPGG PGGRPGGGRP GEGRPPRGR
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