| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6040 |
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| Symbol | sdhA |
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| ID | 6135406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 6626713 |
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| End bp | 6628539 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641646139 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001772751 |
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| Protein GI | 170744096 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.187811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA ACGGAAAAGC CGCGCCGGCC CAGACCGGCC AGGCGTACCC CATCGTCGAG
CACAGCTTCG ACGTCGTCGT CGTCGGCGCC GGCGGCGCGG GGCTGCGCGC CACGGTCGGC
TGCAGCCAGG CGGGCCTGCG CACCGCCTGC ATCACCAAGG TCTTCCCGAC CCGCTCGCAC
ACGGTCGCGG CCCAGGGCGG CATCTCGGCC TCCCTCGGCA ATATGGGCCC GGACGATTGG
CGCTGGCACA TGTACGACAC CGTGAAGGGG TCGGACTGGC TGGGCGACCA GGACGCGATC
GAGTACCTGG TGCGCAACGC CCCGGCCGCG GTCTACGAGC TCGAGCACTG GGGCGTGCCC
TTCTCGCGCA CGGCCGAGGG CAAGATCTAC CAGCGGCCCT TCGGCGGCAT GACCACCGAT
TACGGCAAGG GCACGGCCCA GCGCACCTGC GCGGCGGCCG ACCGCACCGG CCACGCCATG
CTGCACACCC TCTACGGGCA GGCGGTCAAG AACCGGACCA ACTTCTTCAT CGAGTACTTC
GCCCTCGACC TGATCATGGA CGAGGAGGGC CGCTGCCGCG GCGTCATCGC CCTCGACCAG
GCCACCGGCG AGATCCACCG CTTCCGCGCC GCCATGACCA TCCTGGCGAC GGGCGGCTAC
GGGCGCGCCT ATTTCTCGGC GACCTCGGCC CATACCTGCA CGGGCGACGG CAACGCCATG
GTGCTGCGCG CCGGCCTCGC CCTCGAGGAC ATGGAATTCG TGCAGTTCCA CCCGACCGGC
ATCTACGGGG CGGGCTGCCT GATCACCGAG GGCGCCCGCG GCGAGGGCGG CTACCTCACC
AATTCGGAGG GCGAGCGCTT CATGGAGCGC TACGCGCCCT CGGCCAAGGA CCTCGCCTCC
CGCGACGTGG TCTCCCGCTC CATGACCATG GAGATCCGCG CCGGCCGCGG CGTCGGCAAG
AACAAGGACC ACATCTACCT CCACCTCGAC CACCTCGATC CCAAGATCCT GCACGAGCGC
CTGCCCGGCA TCTCGGAATC GGCCAAGATC TTCGCCGGCG TCGACGTCAC CAAGGAGCCG
ATCCCGGTGC TCCCGACCGT CCATTACAAC ATGGGCGGCA TCCCGACGAA CTATCACGGC
GAGGTGCTGA CCCTGCGGGA CGGCAATCCC GACTACGTGG TGCCGGGCCT GATGGCGATC
GGCGAGGCGG CCTGCGTGTC GGTGCACGGG GCGAATCGGC TCGGCTCCAA CTCGCTCATC
GACCTCGTGG TGTTCGGCCG CGCGGCCGGG CTGCGCTGCG CCGAGATCGT GGAGGCGAAC
GGCCGGCTGC CGGACCTGCC GAAGGACTCG GCCGACAAGG CGCTCGCCCG CCTCGACCGC
TTCCGCTACG CCAATGGCGG CAGGCCGACC GCGGAGCTGC GCCTCGACAT GCAGCGGACG
ATGCAGAACA ACTGCGCGGT CTTCCGCACC GGCGAGGTCC TGGAGGAGGG CAAGCACCTC
ATCCACAAGG TCTGGTCGGG CATCGACGAC ATCCGGGTCA CCGACCGCTC GCTGGTCTGG
AACACCGACC TGCTGGAGAC GCTCGAATTC GACAACCTGA TCGGCCAGGC GGTGGTCACG
ATGGAATCGG CGGTCAACCG CACCGAATCC CGCGGCGCCC ATGCCCGCGA GGACTTCCCC
GACCGCAACG ACAAGGACTG GATGAAGCAC ACCCTCGCCT GGCTCGACCC GGAGGGCCGC
AAGGTCACGA TCGACTACCG GCCGGTCCAC ACCTACACGA TGTCGAACGA CATCGCCTAT
ATCGAGCCGA AGGCGCGGGT CTATTGA
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| Protein sequence | MAINGKAAPA QTGQAYPIVE HSFDVVVVGA GGAGLRATVG CSQAGLRTAC ITKVFPTRSH
TVAAQGGISA SLGNMGPDDW RWHMYDTVKG SDWLGDQDAI EYLVRNAPAA VYELEHWGVP
FSRTAEGKIY QRPFGGMTTD YGKGTAQRTC AAADRTGHAM LHTLYGQAVK NRTNFFIEYF
ALDLIMDEEG RCRGVIALDQ ATGEIHRFRA AMTILATGGY GRAYFSATSA HTCTGDGNAM
VLRAGLALED MEFVQFHPTG IYGAGCLITE GARGEGGYLT NSEGERFMER YAPSAKDLAS
RDVVSRSMTM EIRAGRGVGK NKDHIYLHLD HLDPKILHER LPGISESAKI FAGVDVTKEP
IPVLPTVHYN MGGIPTNYHG EVLTLRDGNP DYVVPGLMAI GEAACVSVHG ANRLGSNSLI
DLVVFGRAAG LRCAEIVEAN GRLPDLPKDS ADKALARLDR FRYANGGRPT AELRLDMQRT
MQNNCAVFRT GEVLEEGKHL IHKVWSGIDD IRVTDRSLVW NTDLLETLEF DNLIGQAVVT
MESAVNRTES RGAHAREDFP DRNDKDWMKH TLAWLDPEGR KVTIDYRPVH TYTMSNDIAY
IEPKARVY
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