| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5878 |
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| Symbol | |
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| ID | 6132932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 6463277 |
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| End bp | 6464668 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641645987 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001772599 |
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| Protein GI | 170743944 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.539647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACA GATCCCATCG GGCATATCGC GGGCTTCGGC TCGGCGGCCT TGCCGGCCTC
GCGCTCGCGC TGGCCGGTCA ACCGGCGGCG GCCGAGACGC TGGAGACCGC GCTGGCCCGC
GCCTATGCGG GCAACCCGAC GCTCAATTCG CAGCGGGCCG GCCAGCGGGC GACCGACGAG
AACGTGGCCC GCGCCCTGTC GGGTTACCGC CCGACGGTGA GCGGCACCGC CGCCATCGGC
GTGCAGAATA CCAGCGGCGC CCAGGGCGGG GTGCGCATCA GCCAGACCAT CGTGCCGGGC
AGCGCCGGGC TGACCGTCAA CCAGACCCTG TTCAACGGAT TTCTCACCGA CAACCAGACG
CGGCAGGCCG AATCGCAGGT GCTCGGGGGG CGCGAGAGCC TGCGCAACGT CGAGATGACG
ATCCTGTTCA ACGCGGCCCA GGCCTACATG AACGTGCTCG CCGACACGGC GACGCTCGAA
CTCAACCGCA ACAACGTCGA GGTCCTGGAA GAGCAGCTGC GCCAGACCCG CGACCGCTTC
AACGTCGGCG AGGTCACCCG CACCGACGTG GCCCAGGCCG AGGCGCGGCT CGCCGGCGCC
CGCTCGCAGG TCAGCCTCGC GGAATCGAAC CTGCGCACCA GCATCGCCAC CTACCGGCAG
GTCGTCGGCG TCGAGCCGCG CCAGCTCGCC CCGGGCCGCC CGCTGGACCG CTTCGTCCCG
GGCAACCTGA CCGCCGCGAT CGATATCGGC CTGCGCGAGC ACCCGCAGGT CATCTCGGCC
CTGCACGCCG TGGATGTCGC CGAGGCCCAG GTCAAGATCG CCGAGGCCGC CCTCTACCCG
ACGGTGAGCG TCAGCGGCAC CGTCCAGAAG CTCTTCGACC AGCAATTCGC CCATACCGAA
CTGTTCGAGG GCGCCGTCAC GGCGCGGCTC AGCGTGCCGC TCTACCAGGG CGGGGTCGAG
TACGCCGCGA TCCGGCAGGC CAAGGAGCAG GTGGGACAGA CGCGCATCCA GGTCGAGACC
TTCCGCGATC AGGTCCGCGC GGCGATCGTC ACCGCCTGGG GCGGGCTCGA AGCCGCCAAG
GCCCGGGTCA TCGCCCAGCA GGCCCAGGTC CAGGCCAACG AGGTCGCGCT CAACGGGGTG
CGCGAGGAGG CCCGGGTCGG CCAGCGCACC ACCCTCGACG TGCTGAACGC GCAGCAGGAA
CTGCTCTCGG CCCGCGTCAA CCTGATCGCC GCCCAGCGCG ACCGCGTGGT CAGCTCCTAC
CAGGTCGTGC AATCGATCGG CCGCCTCACC ACGGCCTTCA TCAACGTGCC GGTCGCCCAG
TACAGTGCCA AGCTGCACTT CGATCAGGTC AAGGATCTCT GGTACGGGGT GCGGACGCCG
GACGGCCGCT GA
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| Protein sequence | MTDRSHRAYR GLRLGGLAGL ALALAGQPAA AETLETALAR AYAGNPTLNS QRAGQRATDE
NVARALSGYR PTVSGTAAIG VQNTSGAQGG VRISQTIVPG SAGLTVNQTL FNGFLTDNQT
RQAESQVLGG RESLRNVEMT ILFNAAQAYM NVLADTATLE LNRNNVEVLE EQLRQTRDRF
NVGEVTRTDV AQAEARLAGA RSQVSLAESN LRTSIATYRQ VVGVEPRQLA PGRPLDRFVP
GNLTAAIDIG LREHPQVISA LHAVDVAEAQ VKIAEAALYP TVSVSGTVQK LFDQQFAHTE
LFEGAVTARL SVPLYQGGVE YAAIRQAKEQ VGQTRIQVET FRDQVRAAIV TAWGGLEAAK
ARVIAQQAQV QANEVALNGV REEARVGQRT TLDVLNAQQE LLSARVNLIA AQRDRVVSSY
QVVQSIGRLT TAFINVPVAQ YSAKLHFDQV KDLWYGVRTP DGR
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