Gene M446_5806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5806 
Symbol 
ID6130995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6381532 
End bp6382752 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content70% 
IMG OID641645913 
Productaminotransferase 
Protein accessionYP_001772527 
Protein GI170743872 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.658046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00092388 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGATT TTCACCGCAT CAAGCGACTG CCCCCCTACG TCTTCGAGCA GGTCAACCGG 
ATCAAGGCCG CCGCCCGCGC CAACGGCGCC GACATCATCG ATCTCGGCAT GGGCAATCCG
GACCTCGACG CGCCGCGCCA CGTGATCGAG AAGCTGATCG AGACCGCCGG CAAGCCGCGC
ACCGACCGCT ACTCGGCCTC GAAGGGCATC GCCGGCCTGC GCCGGGCCCA GGCCGGCTAC
TACCAGCGCC GCTTCGGCGT GAGCCTGAAC CCCGAGACCC AGGTCGTGGC GACCCTCGGC
TCGAAGGAGG GCTTCGCCAA CATGGCCCAG GCCATCACGG CGCCGGGCGA CGTGGTGCTG
GTGCCCAATC CGAGCTACCC GATCCACGCC TTCGGCTTCC TGATGGCGGG GGGCGTGATC
CGCTCGGTCC CGGCGGAGCC GACGCCGGCC TTCTTCCCGG CCGTCGAGCG GGCGGTGCAG
CACTCGATCC CCAAGCCGGT GGCGCTGGTG GTCTGCTACC CCTCGAACCC GACCGCCTAC
GTCGCCTCCC TCGACTTCTA CCGGGACCTC GTCGCCTTCG CCAAGAAGCA CGACCTGATC
CTGCTCTCCG ACCTCGCCTA CGCGGAGGTC TATTTCGACG ACGCCAACCC GCCGCCCTCC
GTGCTGCAGG TGCCGGGCGC CATCGACGTG ACGGTGGAGT TCACCTCCCT GTCGAAGACC
TTCTCGATGG CGGGCTGGCG GATGGGCTTC GCGGTCGGCA ACGAGCGGCT GCTCGCGGCC
CTGACGCGCG TGAAGTCCTA CCTCGATTAC GGCGCCTTCA CGCCGATCCA GGTCGCCGCG
ACCGCCGCCC TGAACGGGCC GGACGCCTGC ATCCACGAGA TGCGCGCCAC CTACCGGCGG
CGGCGCGACG CGCTGGTCGA TTCGTTCCAG AAATGCGGCT GGGCGATTCC CGCCCCCTCC
GCCTCGATGT TCGCCTGGGT GCCGATCCCG GAGAAGTTCC GCGGCCTCGG CAGCCTCGAA
TTCTCCAAGC TGCTGGTCGA GAAGGCGGAC GTGGCGGTGG CGCCGGGCAT CGGCTTCGGG
GAGCACGGGG ACGAGTTCGT GCGCATCGCC CTGGTCGAGA ACGAGCAGCG CATCCGCCAG
GCCGCCCGCA ACATCCGCCG CTTCTTCGAG GGGGCGGAGC GCACCCTGCA CAACGTGGTC
CCCCTGCAGA AGGCGGTCTG A
 
Protein sequence
MTDFHRIKRL PPYVFEQVNR IKAAARANGA DIIDLGMGNP DLDAPRHVIE KLIETAGKPR 
TDRYSASKGI AGLRRAQAGY YQRRFGVSLN PETQVVATLG SKEGFANMAQ AITAPGDVVL
VPNPSYPIHA FGFLMAGGVI RSVPAEPTPA FFPAVERAVQ HSIPKPVALV VCYPSNPTAY
VASLDFYRDL VAFAKKHDLI LLSDLAYAEV YFDDANPPPS VLQVPGAIDV TVEFTSLSKT
FSMAGWRMGF AVGNERLLAA LTRVKSYLDY GAFTPIQVAA TAALNGPDAC IHEMRATYRR
RRDALVDSFQ KCGWAIPAPS ASMFAWVPIP EKFRGLGSLE FSKLLVEKAD VAVAPGIGFG
EHGDEFVRIA LVENEQRIRQ AARNIRRFFE GAERTLHNVV PLQKAV