Gene M446_5292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5292 
Symbol 
ID6130340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5808643 
End bp5809626 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content74% 
IMG OID641645426 
Producthypothetical protein 
Protein accessionYP_001772049 
Protein GI170743394 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.562532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.378234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGGC GTCGATTTCT GTCCGGCCTC GGCCTCGCCC TGGTGCGACC GCGCGGGGCC 
GCGGCGCAGC CGGCCCCGCT CCCCGCCCTG GGCCTCCTGT GCAGCGAATC GCCGGAGCTT
TGGACCTCGC GCGTCGACGC CTTCCGGGCC GGGCTCGCGG AGGCCGGATA CGTCGAGGGC
CGCGACGTGC GGTTCAGCTA CCGCTGGGCG CGGGGGCGGA ACGACCGCCT CGACGGGATG
GCCGAGGATC TCGTGCGCGA GGGCGTCGCC GTCATCGTGG TCCTCGGCAA CACGACCTCG
GCGCTCGCCG CCAAGCGCGC GACGGAGCGG ATCCCGATCG TCGTGCGGAT GGCGGTCGAC
CCTGCGAGCA TCGGGCTCGT CCAGAGCACG AGCCGGCCCG GCGGCAACCT GACCGGCTGG
ACCACCCTCG GCGCCCAGAT CGGGCCGAAG CAGCTCGAGC TCCTGCGGGA GCTCATCCCG
CCCGGGGTGG TGGTCGCGGT TCTCGTCAAC CCGACGAACC CGATCCTGGC CGACCGCCAG
GCGAGGGAGG TTCCCGAGGC TGCCCGCGCC CTCGGCTTCG AGCCGCTGGT GGTCACGGCG
AGCGGCGACG CCGACATCGC CGCGGCCTTC GCGCGGCTGA GCGGCGCCGG AGCGCGCGGG
CTGATCCTCG GCGCGGACAC GTTCTTCAAC AGCCGCAACG ACCTGATCGC CGCGCAGGCG
CGCGACGCCG CCGTGGCGGC GATCTCCGCC TACCGCGAAT TCGCGCTCGC GGGCGGCCTC
ATGAGCTACG GCGGCAGCGT CGCCGAGGCG TCCCGCCGGG TCGGCGCCTA TGTCGGCCGC
ATCCTCGGCG GCGAGCAGCC CGGCGACCTG CCCGTGCAGC AGATCAAGAA ACTCGACCTC
GTGCTCAACC TGAGGACGGC CCAGCACCTC GCCATCAAGA TCCCGCTGCC GGTCCTCGCC
CGCGCGGACG AGATCCTGGA ATGA
 
Protein sequence
MDRRRFLSGL GLALVRPRGA AAQPAPLPAL GLLCSESPEL WTSRVDAFRA GLAEAGYVEG 
RDVRFSYRWA RGRNDRLDGM AEDLVREGVA VIVVLGNTTS ALAAKRATER IPIVVRMAVD
PASIGLVQST SRPGGNLTGW TTLGAQIGPK QLELLRELIP PGVVVAVLVN PTNPILADRQ
AREVPEAARA LGFEPLVVTA SGDADIAAAF ARLSGAGARG LILGADTFFN SRNDLIAAQA
RDAAVAAISA YREFALAGGL MSYGGSVAEA SRRVGAYVGR ILGGEQPGDL PVQQIKKLDL
VLNLRTAQHL AIKIPLPVLA RADEILE