Gene M446_5279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5279 
Symbol 
ID6128976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5794115 
End bp5794714 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content66% 
IMG OID641645414 
Productpolyhydroxyalkonate synthesis repressor, PhaR 
Protein accessionYP_001772037 
Protein GI170743382 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0633447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACA GCGGCAAGTC GACACCCACC GTCATCAAGA AGTACGCCAA CCGGCGTCTC 
TACCACACCG GCACGTCGAC CTACGTGACC TTGGAAGACC TTGCCGCCAT GGTTCAGGCC
GGCGAGGATT TCGTGGTCTA CGATGCGAAA TCCGGTGAGG ACATCACGCG CTCGGTGCTG
ACGCAGATCA TCTTCGAGCA GGAGAACAAG GCAGGGGCGG AGAATCTGCT CCCCGTCGCG
TTCCTGCGCC AGCTGATCCG GTTCTACGGG GACAGCATGC GGGCGCTGGT GCCGAGCTAC
CTGGAATTCT CGATGGATCA TCTGGCGCGC GAGCAGGATG GCCTGCGCGA GAAGATGTCC
CAGACTTTCG GGGCGAGCGC CTTCCAGCAC GCCATGGAGG AGCAGGTGAG GGCCAACATG
GCCTTCTTCA GCGAGGCGAT GCGGATGTTC ACCCCCTTCA CGCCGGGGGC GCCGACCGAG
AAGCCCGCCG AGGCCGCGCC GCCCGCGGCC CAGCCCGGGG CCTCCCGCGG GGAGCTCGAC
GACCTGCGCC GGCAGATGCT GGAGATGCAG AGCCGGCTCG ACGCCCTCGC CAAGAAGTAG
 
Protein sequence
MADSGKSTPT VIKKYANRRL YHTGTSTYVT LEDLAAMVQA GEDFVVYDAK SGEDITRSVL 
TQIIFEQENK AGAENLLPVA FLRQLIRFYG DSMRALVPSY LEFSMDHLAR EQDGLREKMS
QTFGASAFQH AMEEQVRANM AFFSEAMRMF TPFTPGAPTE KPAEAAPPAA QPGASRGELD
DLRRQMLEMQ SRLDALAKK