Gene M446_5178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5178 
Symbol 
ID6135731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5699753 
End bp5701486 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content68% 
IMG OID641645312 
Productmajor facilitator transporter 
Protein accessionYP_001771937 
Protein GI170743282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.763618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.147804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAG CAACCGCGGT CGGTCAGGCG GTCGATGCCG CCCGTCCGAT GAGCCGGGAG 
GAGAAGCGGG TCATCCTGGC TTCGTCCCTC GGCACCGTCT TCGAGTGGTA CGATTTCTAT
CTCTACGGCT CGCTCGCCGC GGTGATCGGC GCGCAGTTCT TCTCCGCCTA CCCGGAGGCG
ACGCGCAACA TCTTCGCGCT GCTCGCCTTC GCGGCGGGCT TCCTGGTGCG GCCCTTCGGC
GCCCTGGTGT TCGGGCGGCT CGGCGACATG GTCGGGCGCA AGCACACCTT CCTCATCACC
ATCCTGATCA TGGGCCTGTC GACCTTCTGC GTCGGCCTCC TGCCCTCCTA CGGCGCGCTC
GCCGCCTACG GCATCGGCTG GCTCGCCCCG GTGACGCTGC TCGCCCTGCG CATGCTGCAG
GGCCTGGCGC TCGGCGGCGA GTACGGGGGC GCGGCCGTCT ACGTGGCCGA GCACGCGCCC
CGCAACCGGC GCGGCTTCTA CACCTCCTTC ATCCAGACGA CGGCGACGCT CGGGCTGCTG
CTCTCGCTGA TCATCATCCT GTCGACCCAG GGCTACGTGA ACGCGGCCTA CCCGCCGACC
GTGACGCAGA ACCCGGACGG CACCACGACG ACGCTCACCG CCTTCCAGGT CTGGGGCTGG
CGCATTCCCT TCCTGGTCTC GGTGGTGCTG CTCGCCATCT CGGTCTGGAT CCGCCTGCAG
ATGCAGGAGA GCCCCGCCTT CAAGAAGATG AAGGAGGAGG GCACCCACTC GAAGGCCCCG
CTCTCGGAGG CGTTCGGCCA GTGGCGCAAC GCCAAGTGGG CGCTCCTCGC CCTGCTCGGC
CTCACCGCCG GCCAGGCCGT GGTCTGGTAC ACGGGCCAGT TCTACGCCCT CTTCTTCCTC
CAGAGCATCC TCAAGGTCGA CCAGTACACG GCGAACGTGC TGATCGCCTG GTCGCTGGTT
CTGGGCACCG GCGGCTTCCT GTTCTTCGGC GCGCTGTCCG ACCGGGTCGG CCGCAAGCCG
ATCATCCTGG GCGGCTGCCT GATCGCGGCG ATGACCTACT TCCCGCTCTT CAAGGTGCTG
ACCGCCAACG CCAACCCGAA GCTCTACGCG GCGCAATCCA GCGTCGAGGT CGTGGTCAGG
ACGAACCCGG ACGAGTGCTC GTTCCAGTTC AACCCGGTCG GCACGGCCAA GTTCACCAAG
GAGTGCGACG TCGCCAAGGC GCTGCTCGCC CGCAACGCGG TGAACTACCG GACCGAGGCG
GTGCCGGCGG GCACGCCCAC CAGCGTGACC GTGGCCGGCA AGTCCTTCGC GGTGAGCGAC
CCGGCCTTCG CCAAGGCAGT GCCGGCCGCC CTCGCGGAGG CGGGCTATCC GGGCGCCAAC
AACCCCGAGA TCGTGAGGGC CCAGCACCCG GTCGACATCT TCTCGGGCCA GAAGCTGACC
GTGGTGGCGG TGCTGACCGT CCTCGTCCTC TACGTGACGA TGGTCTACGG CCCGATCGCC
GCCGCCCTGG TCGAGCTGTT CCCGACCCGG ATCCGCTACA CCTCGATGTC CCTGCCCTAC
CACATCGGCA ACGGCTGGTT CGGCGGCCTC CTGCCCGCCA CCGCCTTCGC CATGGTGGCC
CAGACCGGCG ACATCTATTA CGGCCTCTGG TACCCGATCG TGATCGCCAT GATGACCTTC
GTCATCGGCC TCCTGTTCGT GCCCGAGACC AAGGACCGCG ACATCCTGGC CTGA
 
Protein sequence
MATATAVGQA VDAARPMSRE EKRVILASSL GTVFEWYDFY LYGSLAAVIG AQFFSAYPEA 
TRNIFALLAF AAGFLVRPFG ALVFGRLGDM VGRKHTFLIT ILIMGLSTFC VGLLPSYGAL
AAYGIGWLAP VTLLALRMLQ GLALGGEYGG AAVYVAEHAP RNRRGFYTSF IQTTATLGLL
LSLIIILSTQ GYVNAAYPPT VTQNPDGTTT TLTAFQVWGW RIPFLVSVVL LAISVWIRLQ
MQESPAFKKM KEEGTHSKAP LSEAFGQWRN AKWALLALLG LTAGQAVVWY TGQFYALFFL
QSILKVDQYT ANVLIAWSLV LGTGGFLFFG ALSDRVGRKP IILGGCLIAA MTYFPLFKVL
TANANPKLYA AQSSVEVVVR TNPDECSFQF NPVGTAKFTK ECDVAKALLA RNAVNYRTEA
VPAGTPTSVT VAGKSFAVSD PAFAKAVPAA LAEAGYPGAN NPEIVRAQHP VDIFSGQKLT
VVAVLTVLVL YVTMVYGPIA AALVELFPTR IRYTSMSLPY HIGNGWFGGL LPATAFAMVA
QTGDIYYGLW YPIVIAMMTF VIGLLFVPET KDRDILA