Gene M446_5107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5107 
Symbol 
ID6132377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5608075 
End bp5609394 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content73% 
IMG OID641645242 
ProductFeS assembly protein SufD 
Protein accessionYP_001771867 
Protein GI170743212 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0193182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGA TCACCCCCCT GCGCAATGCG GCCGAGACCG GCCTCGCCGC CCTGTTCCAG 
GTCCGGCGCC TGAAGCTGCC GGGCTCGGCC ATCGCCCGCG AGGAGGCCTT CCGCTTCTTC
GAGGCGGCGG GCCTGCCCCA TCGCCGCGTC GAGGCCTTCA AGTATTCCGA CCTCAGGGCG
GCCCTGCGCG AGGCGGCGGC GCCCGCCGAG CCGCCGAGCC CGGAGGCGGC CCGCACCGCG
ATCGTGCGGG CGGAGGGCTT CGCCACCGTC GAGGCGGCGC GGCTGACCTT CGTCAACGGC
CACCTCGTCC CGGCCCTGTC GGATCTCGGC GCGATGCCGG ACGGCGTCGA GGTCGTGCCC
CTGGTCGAGG CGCTGACCGA CGGCCACGCC CTCACGGCCG AGTTCACGCC GGTGGCGCAG
GCCCGCGACA ATCCGATCTA CCAGCTCAAC ACCGCCTTCA TGGCGGACGG GGCCTTGATC
CGGGTCACGG CCGGCGCCAG GCCGGAGCGG CCGCTGCACC TGCGCTTCGT CGGCACCGGC
GCGGAGGCCT TCTCCACCGC CACCCGCACC CTCGTGGTGC TGGAGGGGGG GGCGGCGCTG
ACCCTGGTCG AGAGCCACGA GGGGCCGGAC GGCGTCGGCT ACCAGCCGAA CGACGCCCTC
GACGCGGTGG TCGGCGACGG CGCCACCCTG CGGCACGCGC GGCTCAACCG CGAGGGCGGC
GGGGCGGTCG CCCTCTCGAC CCTCTCGGTC AAGCTCGGGG CCAAGTCGCA CCTGGAGACC
GTGAACGTCG CGACCGGAGC CGCCTTCGCG CGCCACCAGA TCTTCCTGCT CTTCGCCGGC
GCGGAGGCGA CCGCGCAGGT CAACGGCGCC ACCATGCTGA AGGACGGGCA GCTCGGGGAT
TCGACGCTGC TCGCCGACCA TGCCGCCCCC GGCGGCATCA GCCGCGAGCA GTTCAAGACC
GTGATCGACG GCGACGCCAC CGGCGTGTTC CAGGGCAAGA TCATCGTCGC GCAGGTCGCC
CAGAAGACCG ACGGCAAGAT GAAGTCCGAC TGCCTCCTCC TCAGCGACGA GGGGCAGATG
ATGAACAAGC CGGAGCTGGA GATCTTCGCC GACGACGTGG CCTGCGGCCA CGGCGCGACC
TGCGGGGCGC CGGACGAGGA CCTGCTCTTC TACCTGATGG CGCGCGGGCT GCCGCGGGCC
GAGGCGGAGG GGCTGATGAT CCAGGCCTTC CTGGGCGAGG CCATCGAGGC CGTCACCCAC
GAGGGCGCCC GCGCGGCGAT GATCGCCGCG GTGGAGACCT GGCTCGCCGC GCGGCGATGA
 
Protein sequence
MAEITPLRNA AETGLAALFQ VRRLKLPGSA IAREEAFRFF EAAGLPHRRV EAFKYSDLRA 
ALREAAAPAE PPSPEAARTA IVRAEGFATV EAARLTFVNG HLVPALSDLG AMPDGVEVVP
LVEALTDGHA LTAEFTPVAQ ARDNPIYQLN TAFMADGALI RVTAGARPER PLHLRFVGTG
AEAFSTATRT LVVLEGGAAL TLVESHEGPD GVGYQPNDAL DAVVGDGATL RHARLNREGG
GAVALSTLSV KLGAKSHLET VNVATGAAFA RHQIFLLFAG AEATAQVNGA TMLKDGQLGD
STLLADHAAP GGISREQFKT VIDGDATGVF QGKIIVAQVA QKTDGKMKSD CLLLSDEGQM
MNKPELEIFA DDVACGHGAT CGAPDEDLLF YLMARGLPRA EAEGLMIQAF LGEAIEAVTH
EGARAAMIAA VETWLAARR