Gene M446_5030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5030 
Symbol 
ID6129472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5509455 
End bp5510894 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content74% 
IMG OID641645166 
Productpeptidase C14 caspase catalytic subunit p20 
Protein accessionYP_001771791 
Protein GI170743136 
COG category[R] General function prediction only 
COG ID[COG4249] Uncharacterized protein containing caspase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0195468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGGT GGAGACTGGG ACCGCTCCTG ATCCTGGCGG CATGCCTCCT GACCGGGACG 
GGGGCCTCGG CGGCCGACCG GCGCGTCGCC CTGGTGATCG GGAACTCCGC CTACCGCTCC
GTGCCGGTGC TCGCCAATCC GGGCCGCGAC GCCTCGGCCA TGGCGGAGAT GCTGCGCCGG
GCGGGCTTCG AGTCGGTCGA CCTGAGGCAG GATCTCGGCA CGGTCGAGCT GAAACGCACC
GTGCGGGAAT TCATGCAGAC TAGCCGCGAC GCGGACGTTG CGGTGGTGTT CTTCGCCGGC
CACGGCATCG AGGTCGCGGG GGTCAACTAC CTGATCCCGA CCGATGCCCG CCTGCGGACC
GATTTCGACG TCGAGGACGA GGGTTTGTCG CTGGAGCGGG TGATCCGCGC GATCGAGCCG
GCGCGGCGCC TGCGCCTCGT CATCCTGGAT GCCTGCCGCA ACAACCCGTT CAACGTCGGC
ATGCAGCGGA TGGTGAGCAT CCGGGGCGTG GCGAACGGCC TCGCCAAGGT GGACCCGCTG
ATCAGCGACA CCCTCGTGGC CTTCGCGGCC AAGGCCGGGT CGGTCGCCGA CGACGGCGGC
GGCGACCACA GCCCCTTCAC GACGGCGATG CTCAAGCACC TCGCGGCGCC GGGCCTCGAC
GTGCGGGTCG CCTTCGGGCG GGTCCGCGAC GAGGTTCTGC GCCTCACCGG CGGCAAGCAG
GAGCCCTTCG TCTACGGCTC CCTCGGGGGC GCCACCATGG CGCTGGTGCC GGACGTCAGG
GCCGCCGACC CGGAGGGCGA CCCCAAGGAG ATGCGGCGCG ACTACGAATT CGCCGAGCGC
GTCGGCACGC GGGAGGCGTG GTCCTCCTTC CTGGCCGCGC ATCCGGCCGG CTTCTACGCG
GATCTGGCCC GCGCCCAGGT GGCCAAGCTC ACGGGCAGCC CGGCCGCGCC GCCGGCCGGC
GAGCCAGCCC GCCGGCCGCT CCCGCAGACG CGGCCGGTCG GCACCGACCC GGCGACCGCC
GCCGTCGCGC CCGGCCCCGC CGCTTCCCCG CCCGGCGCCG AGCACAACGG GGCCTGCCAG
CGCGAGGCCC AGACCCTCGC CCGCCTGCGC GCGACCCGCG CGCCGGAGGC AGTGCTGCGC
TTCGAGCGCG AATTCACCTG CGAGGCGCTG CGCCCGCAGC TCGCCCGGCT GATCGAGGCG
GTGCGTCCGC CCGCACCGCC TTCCGTTCTG CCCGACCCGA TCCCGCCGAT CCCCGGCGAG
CCGCTGACGA CGAGCACGGC GCGGGCGACC CCGGGCGCCT GCGAGCGCGA GGCCCAGATC
CTCGCCCAGC TGCGCAACAG CCGCGACGTG CCGGCGATCG ACCGCTTCGC GCGCGACCTC
AGCTGCCAGG AGCTGCGCCC GCAGCTGCAG CGCCTGCGCG AGAGCGTGGG CGAGGAGTGA
 
Protein sequence
MLRWRLGPLL ILAACLLTGT GASAADRRVA LVIGNSAYRS VPVLANPGRD ASAMAEMLRR 
AGFESVDLRQ DLGTVELKRT VREFMQTSRD ADVAVVFFAG HGIEVAGVNY LIPTDARLRT
DFDVEDEGLS LERVIRAIEP ARRLRLVILD ACRNNPFNVG MQRMVSIRGV ANGLAKVDPL
ISDTLVAFAA KAGSVADDGG GDHSPFTTAM LKHLAAPGLD VRVAFGRVRD EVLRLTGGKQ
EPFVYGSLGG ATMALVPDVR AADPEGDPKE MRRDYEFAER VGTREAWSSF LAAHPAGFYA
DLARAQVAKL TGSPAAPPAG EPARRPLPQT RPVGTDPATA AVAPGPAASP PGAEHNGACQ
REAQTLARLR ATRAPEAVLR FEREFTCEAL RPQLARLIEA VRPPAPPSVL PDPIPPIPGE
PLTTSTARAT PGACEREAQI LAQLRNSRDV PAIDRFARDL SCQELRPQLQ RLRESVGEE