| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4988 |
|---|
| Symbol | |
|---|
| ID | 6129905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 5475587 |
|---|
| End bp | 5476204 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641645124 |
|---|
| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| Protein accession | YP_001771750 |
|---|
| Protein GI | 170743095 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTGT CCGAGACTGA CCTTTCGGGA GTGTACATCG TCGACATCGA TCCGAGGCGC
GACGAGCGAG GTCACTTCGC CCGCATCTTC TGCACCCAGG AACTCGCTGA GCGAGGCCTG
ATCCATCACA TTCCGCAAAT AAGCTTGAGC TACAACATCA AGCGCGGCAC CCTTCGCGGC
ATGCATTTCA AGTACCCGCC CTACAGCGAG ACCAAATACG TGCGCTGCGT TCGCGGGAGG
ATCTTCGACG TGGTCGTCGA TCTCCGCCCG GAATCGCGGA CCTACCTGGG CCATCTCTGT
GCCGAACTGT CGGCCGAGAA CGGGCGCTGC CTCTACATTC CGGAGCGGTG CGCGCACGGC
TTCATCACTT TGGAGGACGA TAGCGAAGTG ATGTACATGA TCTCCGCACC TCACGCGCCC
GACGGGGAGG GCGGCCTCGT CCACGACGAT CCGCGGCTCG CGATTCCCTG GCCGATCCCG
GTCGAGGTGA TATCCAGGCG CGACGCCGAG TGGCCGGCGC TCGCCGAGGT CGAGGACGCG
GTGCGGTCGC GCATGGCGCT GCGCGGCCCG GAGCCGCGCC CGATCGCGTC GCAGTCGGAC
GCTGCTCTCG GCCGGTGA
|
|---|
| Protein sequence | MIVSETDLSG VYIVDIDPRR DERGHFARIF CTQELAERGL IHHIPQISLS YNIKRGTLRG
MHFKYPPYSE TKYVRCVRGR IFDVVVDLRP ESRTYLGHLC AELSAENGRC LYIPERCAHG
FITLEDDSEV MYMISAPHAP DGEGGLVHDD PRLAIPWPIP VEVISRRDAE WPALAEVEDA
VRSRMALRGP EPRPIASQSD AALGR
|
|---|
| |