Gene M446_4940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4940 
Symbol 
ID6135280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5421111 
End bp5421812 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content77% 
IMG OID641645076 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_001771703 
Protein GI170743048 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCG TGGGCATGGA TGGCACCGTT CCGGTCGACC TGCGGCTCTA CGGCATCCTC 
GACGTCGGGG TGAGCGGCGG CGATCCCGCG CTGCTCGCGC GCATGGCCGG CGCGGCCGCG
GCGGGCGGCT GCACCCTGCT CCAGTACCGC GAGAAGGCGA TCCCGAACGC CCGCGAGAGC
CTCGCCCGCC TGCGGGCGAT CCGGGCGGCC CTGTCGGGCA GCGGCGTGCC GCTCCTCGTC
AACGACCGAG TCGACCTCGC GCTGGCGGCC GGGGCCGAGG GCGTGCATCT CGGCCAGGAG
GACCTGCACC CGGCCGAGGC CCGCCGGCTG CTCGGGCCCG GGGCGATCAT CGGCCTCACC
GTCAAGACCG GCACCCAGGC GGACGAACTC TACCGCCTGC CGGTGGACTA CGCCTGCATC
GGCGGCGTCT TCGCGACCGC GAGCAAGCGC AACCCGGACC CGCCGGTGGG GCTGGAAGGC
CTCGCGCGCA TCGCCTTCCG GGCCCGGCTC GCCCGGGGCG GCCTGCCGAT CGGGGCGATC
GCCGGGATCG ATTCCGGCAA CGCCGCCTCG GTGATCGGCG CGGGGGCGGA CGGCATCGCG
CTGATCTCGG CCCTGTTCGG CGCTCCCGAC GAGGTCGAGG CGCGGGCGCG CGCGCTGCGC
CAGCTGGTCG ATCGGGCGCT CGCGGCGCGG GGGGCGGCGT GA
 
Protein sequence
MRPVGMDGTV PVDLRLYGIL DVGVSGGDPA LLARMAGAAA AGGCTLLQYR EKAIPNARES 
LARLRAIRAA LSGSGVPLLV NDRVDLALAA GAEGVHLGQE DLHPAEARRL LGPGAIIGLT
VKTGTQADEL YRLPVDYACI GGVFATASKR NPDPPVGLEG LARIAFRARL ARGGLPIGAI
AGIDSGNAAS VIGAGADGIA LISALFGAPD EVEARARALR QLVDRALAAR GAA