| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4281 |
|---|
| Symbol | |
|---|
| ID | 6130769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4718340 |
|---|
| End bp | 4719341 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641644422 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001771061 |
|---|
| Protein GI | 170742406 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACA AGCCGTTGCG CGACCAAGTC ATCGTGGTCA CCGGGGCATC GAGCGGCATC
GGCTTGGCGA CAGTTCGCAT GGCAGTCGAG AGGGGTGCCC GGGTCGTCCT CGCCGCCCGC
AGCGAGGACG TGCTTGCGCA GGTGGCCGAG GAACTCGACC CCCGAACCGT TTACGTCGCT
GCCGATGTCG GCCGCCGGGA GGACGTCCAG GCCATCGCCG ACAAGGCCCT CGCGACGTTC
GGCGGGTTCG ACACCTGGGT CAACGTGGCC GGCCTAACCG TCTACGGACC CTTGCGCGAG
ATCGCCCCGG AGGACCACGA GCGGCTGATA CGGACCAATT TCTGGGGCAC CGTCTACGGC
TCCCTCGTGG CAGCCGAGCA CCTGCGGGAG CACGGTGGTG CTCTGATCAA CGTCGGCAGC
ATCGGCTCCG ACCTCGCCTT CCCGTTCCAG GGTCTCTACG CCGCCTCGAA GCACGCGGTG
AAGGGCTTCA CCGACACGCT GCGCATGGAG CTGATCGCGG AGGGCGCGCC GGTCTCCGTC
ACGCTGGTGA AACCTGCCTC CATCGATACG CCACTGCCGA ACCGGGCGCG CAACTACACG
GACCGCGAAC CGATGCTGCC GCCGCCGGTC TACCCGCCCG AGGAAGTGGC CAACGCCATC
CTGCACGCGG CCGTGCACCC GCAGCGCGAC ATCTTCGTGG GCGGGGCCGG CAAGCTGTTC
GTGATGGGCA AGGAGTTCGC CCCCGGTGCC TACGACGAGT TCGCACCGGC CATTATCGCG
CTGCAGAAGC GGTCCGAGGC GCCCAGAGAC CCGACGGGCG CGCTGCATGC CCCCCAGGGG
CGCCGGGCAG GTGCGCGGCG ATGCGCCGAT CCCCGTCATG CGCACCAGCG CTTACACCCG
GGCGACCTTG CACCCACTGG CGACGGCGGG GGTTGCTGCC GGCTTGGCCG CGACGGCGGC
CCTGCTCCTC GGCAACGGAC GTGGCCGACG TCGGTGATGT GA
|
|---|
| Protein sequence | MRHKPLRDQV IVVTGASSGI GLATVRMAVE RGARVVLAAR SEDVLAQVAE ELDPRTVYVA
ADVGRREDVQ AIADKALATF GGFDTWVNVA GLTVYGPLRE IAPEDHERLI RTNFWGTVYG
SLVAAEHLRE HGGALINVGS IGSDLAFPFQ GLYAASKHAV KGFTDTLRME LIAEGAPVSV
TLVKPASIDT PLPNRARNYT DREPMLPPPV YPPEEVANAI LHAAVHPQRD IFVGGAGKLF
VMGKEFAPGA YDEFAPAIIA LQKRSEAPRD PTGALHAPQG RRAGARRCAD PRHAHQRLHP
GDLAPTGDGG GCCRLGRDGG PAPRQRTWPT SVM
|
|---|
| |