Gene M446_4044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4044 
Symbol 
ID6128946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4511245 
End bp4512096 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content73% 
IMG OID641644199 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001770839 
Protein GI170742184 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.341213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGC GCCTCCCCGA CGTCACGGTC TACGACCTGC GGCTGGCGAG CCCGCTCGCC 
CTGTTCTTCG CGGCCTTCTT CGCGGCGCCG CTCGCGGCGC TGCTCGGCCT CTCGCTCAAG
GGGCCGGACG GAACCCTGGG CCTCGCGCAG TACGCGGCGT TCCTCGGCGA TCCTTTCAGC
CTCGGCGTGC TCGGCGCGAC GCTCTGGCTC GGGCTCAAGG TGACGCTCGT CTGCCTGATC
CTCGGCTACC CGCTCGCCCT GGTGGCGACC CGGGCCGGGG GGCGGGTGCG CGGCCTCGTC
ATCCTGGCGG TGCTCACGCC CCTCCTCACC AGCGTGGTGA TCCGCACCTT CGCGTGGATC
GTCATCCTGG GCCGCCAGGG CGTGGTCAAC GGCGCGCTCG CCTCCCTCGG GGTGAGCGGC
CCGCCCCTGC GGCTCCTCTA CGCGGAGGGC GGGCTGGTGG CGGCCCTCGC GCAGGTGCAG
ATGCCCCTGA TGGTGCTGCC GCTGATGACG GCGCTGGCCC GCATCGATCC GAGCCTGTGG
GACGCCTCCG AGGCGCTCGG GGCCGGGCGC TGGCGCACCT TCCGGCGGGT GACGCTGCCC
CTCTCCCTGC CGGGGCTGAT CGCCGGCTCG GTCCTCACCT TCGCGGCGGC GATCTCGGGC
TTCATCACCC AGTCGCTGAT CGGGGGCGGG CAGATGCTGT TCATGCCCGG CTACATCTAC
CAGCAGGCGA TCGCCCTGCA GAACTGGCCC TTCGCGGCGG CGATGTCGGT GATCTTCCTC
GTCGCCGTGC TGGCGGTCAT CGTCGCCTTC AACGCGCTCG GCCGCCTCGC GCGCGGCTAC
GCCCAGACCT GA
 
Protein sequence
MRRRLPDVTV YDLRLASPLA LFFAAFFAAP LAALLGLSLK GPDGTLGLAQ YAAFLGDPFS 
LGVLGATLWL GLKVTLVCLI LGYPLALVAT RAGGRVRGLV ILAVLTPLLT SVVIRTFAWI
VILGRQGVVN GALASLGVSG PPLRLLYAEG GLVAALAQVQ MPLMVLPLMT ALARIDPSLW
DASEALGAGR WRTFRRVTLP LSLPGLIAGS VLTFAAAISG FITQSLIGGG QMLFMPGYIY
QQAIALQNWP FAAAMSVIFL VAVLAVIVAF NALGRLARGY AQT