Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_3967 |
Symbol | |
ID | 6130966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4417220 |
End bp | 4419478 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641644127 |
Product | hypothetical protein |
Protein accession | YP_001770767 |
Protein GI | 170742112 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.154728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCTG ATCGCGGAGG TGCTGCGATT CGGCGCGACG GTCGGGAGAT TCCGCGGTTC GCACCGAATT TTTCCGTCTA CGTGCTGCCG CCCAACGTCG TCTGCCTCTA TTCGGAACAC CGCAAGTTCT TCCTCGAAGG CGACCTCTAT GCCGCGCTCG CGCCGCAACT GGCTGCCGGG AGGACTCTCA AGGCGATCTT CGACGCGCTG ACGCTCGACT TCCCGGCTCA GGCGATCACC GAAGCCCTCA GGCGGCTGGT CGAGCGACGC TTCGTCCTGC TCGACCGCGT CGCGGCCGAC GACGCGGCAG CCGCCTTCTG GGCGAGTCTC GGCCTGCCGC CCGGCGCAGC GGAGTGGAAC CTCCGGAACT GCAGGGTGCG GATCCGCGCG CTCGACGTAT CGGGCGCCGA CGACCTCGCG GCGGCGCTGA CCGGTCTCGG CGTGCGCGTG GTCAAGCGCA CCGCCGACCT AACGGTCGTG CTGGTGAACG ATTACCTCGA TGCGCGCCTC GCGGAGACGA ACCGGCGGCA CCTGTCCGAC GAGACGCCCT GGCTGATCGT CCAGCCCTCC GGGATCTTCC CGCTAGTGGG GCCTCTGCTC GCTCCGGGAA AAGGCGCCTG CTGGACCTGC CTCGCCGACC GCATGCGGTG GAACCGCGAG GTGAAGGCGT TTCTGGAACG GCAGCGGGCC GACCCGGTGG CGCTGTCGCC CCTGGTCCGC AACCCGGTCG GGCAGAGCGC GACGCCGTTC GCAGCCATCG AGATCGCGAA GGCGATCGCC ACCGACTTTC GCACGGACCT GCGCGATCAC GTGATCAGCT TCGACCTGAC GGGGGCGACG ATCGCGCGGC ACTTCGTGGC GGCGCGTCCG CAATGCCCTG CATGCGGCCA TCCGGAGCAG CGCGACCCGA ACCGTCCGGC GAACCCGCTC GAACTCAAGG CCGGCGGCAA GCTCGTGCTG ACGAGCGGGG GATACCGAGC GCTGTCGCCC GAGGCCACGC TCGCGCGCTA CCGCAAGCAC GTGAGCCCGC TCACGGGGGT CGTCTCGCGG CTGGAGCCGA TGGAAGCCGA CCTGTCCCTG AACACCAGCT ACGTCGCGCG CCACAACTTC TCGCCGCGCC CCGAAACGGT CCCTGCGCTC AAGGCCGGGT TGGGCAGCGA CAGCTACGGC AAGGGAAGCA CGAGCGAGCA GGCGCAGGCC AGCGCCCTCA TGGAGGCGAT CGAGCGGTAT TCCGGGATCT TCCAAGGCGA CGAGATCAGG GTGGTCCGGC GTTTCGACGA GTTCGGGGCC GGCGAGGCGA TCGCTCCGAA CGACGTCATG CTCTTCAGCG ACGCGCAGTA CCGTCAGGGC CTCACGGGCG CGCACGATCA CGAATCCTTC ATACCGGCTC CCTTCGACCC CTCCGCCGCG ATCGCGTGGT CGCCGGTCTG GTCGCTGCGG GACGCAGCGT TCAAGTACCT GCCCACGAGC TTCCTGTACT ATTTCTGCAG GGGATCGGGC CACGCCGAGA CCAGTGCGGA TTCGAACGGC TGCGCGGCCG GGAACACGAT CGAGGAGGCC ATCGTGCAGG GCTTCCTCGA ACTCGTCGAG CGGGATGCGT ACGCGATCTG GTGGTACAAT CGGCTGCAAA GACCGCCCCT GGACCTGGAT GCACTCGATG ACTCCTACAT TCGCGACCTG CGCGCCCAAT TGACGGAGGC CGGACGCCGA TTGTGGGTGC TCGACATCAC CAACGATCTC GGCATCCCCA GCTTCGTGGC GATCTCGCAC TGGACGGAGA ACGGTGAGGA GTGCGTCGAG TTCGGCTCGG GCTCCCATTT CGACACGCGG ATCGCTGCGC TACGCGCCAT CACCGAACTC AATCAGTTCT TCTCGATCGG GCTCATGGCG CGCCGGCACA GCGTGGATCC GGGTGACGAC AGCGCCCATC GGTGGCGCCT CGACAACAAT CCGTACTTCG TGCCCGACGG TCAGCCGAGG CTCCCACCGG ATTTCCGCTC CGGTTTCGCG CGCCTCGATC GCCGGGACCA AGTCCTCGCC TGCGTGGACC TGATGGCGTC CCGCGGACTC GAATTCCTCG TCCTCGACCA GACGCGGCCG GATATCGGCG TGCCGGTTGT CAAGGTGATC GTTCCCGGGA TGCGGCACTT CTACCCGCGT TTCGGACCCG GCCGGCTCTA CGACGTTCCG CTCGCCCTCG GCTGGCTCGA CCGGAGCGTC CCCGAGCGCG ACCTCAATCC GCTGTTCCCG CCGACCTGA
|
Protein sequence | MTADRGGAAI RRDGREIPRF APNFSVYVLP PNVVCLYSEH RKFFLEGDLY AALAPQLAAG RTLKAIFDAL TLDFPAQAIT EALRRLVERR FVLLDRVAAD DAAAAFWASL GLPPGAAEWN LRNCRVRIRA LDVSGADDLA AALTGLGVRV VKRTADLTVV LVNDYLDARL AETNRRHLSD ETPWLIVQPS GIFPLVGPLL APGKGACWTC LADRMRWNRE VKAFLERQRA DPVALSPLVR NPVGQSATPF AAIEIAKAIA TDFRTDLRDH VISFDLTGAT IARHFVAARP QCPACGHPEQ RDPNRPANPL ELKAGGKLVL TSGGYRALSP EATLARYRKH VSPLTGVVSR LEPMEADLSL NTSYVARHNF SPRPETVPAL KAGLGSDSYG KGSTSEQAQA SALMEAIERY SGIFQGDEIR VVRRFDEFGA GEAIAPNDVM LFSDAQYRQG LTGAHDHESF IPAPFDPSAA IAWSPVWSLR DAAFKYLPTS FLYYFCRGSG HAETSADSNG CAAGNTIEEA IVQGFLELVE RDAYAIWWYN RLQRPPLDLD ALDDSYIRDL RAQLTEAGRR LWVLDITNDL GIPSFVAISH WTENGEECVE FGSGSHFDTR IAALRAITEL NQFFSIGLMA RRHSVDPGDD SAHRWRLDNN PYFVPDGQPR LPPDFRSGFA RLDRRDQVLA CVDLMASRGL EFLVLDQTRP DIGVPVVKVI VPGMRHFYPR FGPGRLYDVP LALGWLDRSV PERDLNPLFP PT
|
| |