Gene M446_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3936 
Symbol 
ID6130255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4383889 
End bp4385019 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content72% 
IMG OID641644094 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001770736 
Protein GI170742081 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.132156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00760667 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGTCAG ACGACCAGAT CCTCATCCGC GACACGGCCC GCAGCTTCGC GCAGGCGCGC 
CTGAGGCCCT TCGCGGCGGA GTGGGACCGG GACTCCCGGT TCCCGCGCGA GGCCGTCGCG
GCCCTGGGCG AACTCGGCTT CCTGGGCATG CTGGTGCCGG AGGCCTATGG GGGCTCGGCC
GTGGACCACG TCTCCTACGC GCTCGCGATC GAGGAGATCG CGGCGGGGGA CGGGGCGGTC
TCGACCATCA TGAGCGTCCA CAATTCGGTG GCCTGCGTGC CGATCCTGCG CTTCGGCACC
GAGGCGCAGA AGGAGCGTTT CCTGGTGCCG CTGGCGCGGG GCGCGCAGCT CGGCGCCTTC
TGCCTGACCG AGCCGGGGGC CGGGTCGGAC GCGGGCGCCG TCACGGCGCG GGCGCGGCGC
GTCGGCAACC GCTACGTCCT CTCGGGCACC AAGCAGTTCA TCACCTCGGG GCGCAGCGCC
GACCTCGCCA TCGTCTTCGC GGTGACCGAT CCGGAGGCCG GCAAGAGGGG CATCTCGGCC
TTCATCGTCC CGACCGCCAC CCCGGGCTAC CGCGTCGCCC GGATCGAGCA CAAGCTCGGG
CAGCGCGCCT CGGACACCGC CCAGATCGTG TTCGAGGACA TGGAGCTGAC GCCCGACCTG
CTGCTCGGGC AGGAGGGAGA GGGGCTGCGG ATCGCCCTCT CCAACCTGGA GGGCGGGCGA
ATCGGCATCG CCGCCCAGGC GGTCGGCATG GCCCGGGCCG CCTTCGAGGC GGCCCTCGCC
TACGCGGGCG AGCGGGAGAC CTTCGGGCAG AAGCTCACCG CCCACCAGGC GGTGGCCTTC
CGCCTCGCCG ACATGGCGAC GCGGATCGAG GCGGCGCGGC TCCTCGTGCA CAACGCCGCG
CGGCTGCGCG ATGCCGGGCA GCCCTGCCTG AAGGAGGCCG CGATGGCCAA GCTCTTCGCC
TCCGAGATGG CCGAGGCCGT GTGCTCGGAC GCGATCCAGA TCCACGGCGG CTACGGCTAC
CTGGCGGATT ATCCCGTCGA GCGCATCTAC CGGGACGTGC GCGTCTGCCA GATCTACGAG
GGCACCAGCG ACGTGCAGCG CATCGTGATC AGCCGGGCGC TGACGGGCTG A
 
Protein sequence
MLSDDQILIR DTARSFAQAR LRPFAAEWDR DSRFPREAVA ALGELGFLGM LVPEAYGGSA 
VDHVSYALAI EEIAAGDGAV STIMSVHNSV ACVPILRFGT EAQKERFLVP LARGAQLGAF
CLTEPGAGSD AGAVTARARR VGNRYVLSGT KQFITSGRSA DLAIVFAVTD PEAGKRGISA
FIVPTATPGY RVARIEHKLG QRASDTAQIV FEDMELTPDL LLGQEGEGLR IALSNLEGGR
IGIAAQAVGM ARAAFEAALA YAGERETFGQ KLTAHQAVAF RLADMATRIE AARLLVHNAA
RLRDAGQPCL KEAAMAKLFA SEMAEAVCSD AIQIHGGYGY LADYPVERIY RDVRVCQIYE
GTSDVQRIVI SRALTG