| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3911 |
|---|
| Symbol | |
|---|
| ID | 6132995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 4357761 |
|---|
| End bp | 4359425 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641644069 |
|---|
| Product | SSS family solute/sodium (Na+) symporter |
|---|
| Protein accession | YP_001770711 |
|---|
| Protein GI | 170742056 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.215473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0942004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCGC GCCTCCTCCC GGCCCTGGTG CCGCTCGCCC TCGCGGCGGG ACCGGCGGCG
GCCGACGCGC TGTCGGGCCC GTCGAGCCGC CAGGCCCTGA ACCCGGTCGC CATCGGCCTG
TTCCTCGCCT TCGTGGCCGT GACCCTCGCC GTCACAATCC GGGCGGCCCG GCGCGGCACC
CGCACGGCGA GCGACTTCTA CGCCGCGGGC GGCTCGCTCG GCGGCGTCCA GAACGGGCTC
GCCATCGCGG GCGACTACAC GTCCGCGGCC ACGTTCCTCG GAGTGACGGC GCTCGTCTAC
GGCTCGGGCT ACGACGGGAT GATCTACGCG GTCGGCTTCC TGGTCGGCTT CCCGATGATC
CTGTTCCTGA TCGCCGAACC CCTGCGCAAT CTCGGCCGCT ACACCTTCGC GGACGTGGCC
GCCTACCGGC TCGCCGAGAT CCCCGTGCGG CTGGTGGCGG GGCTCAACAC CCTGGTGATC
GTGCTCCTCT ACCTGATCGC CCAGATGGTC GGGGCCGGCA AGCTGATCGA GCTCCTGTTC
GGCCTGCCCT ACGCCACGGC GGTGGCGCTG GTGGGCGTGC TGATGATGCT CTACGTCGCC
TTCGGCGGCA TGCGGGCGAC CACCTGGGTG CAGATCATCA AGGCGGTGCT CCTGCTTGCC
GGGACGGCGC TGATGGCGGC GCTCATCCTC GCCCGGTTCG GCTTCAGCCT GGAGGCCCTG
TTCGCGCGGG CCATCGCGCT GCATCCCAAG AGCCGCGCCA TCATGGCGCC GGGCGGGCTC
GTGCGGGATC CGGTCTCCGC GCTCTCGCTC GGCCTTGCGC TGATCTTCGG CACCGCCGGC
CTGCCGCACA TCCTGATGCG GTTCTTCACC GTGGCGGATG CGCGCGAGGC GCGGCTCTCG
GTGCTGGTCG CCACCGGCTT CATCACGGTG TTCTACACGC TGCTCTTCGT GCTCGGCTTC
GGGGCGATCG CCCTCGTGCT CGGCGAGCCC GCCTTCACGG ACGCGGCCGG CCGCCTGATC
GGCGGCCCGA ACATGGTGGC GCTTCACCTC GCCGACCGGC TCGGGGGCGC CCCGCTCCTC
GGCTTCATCT CGGCCGTCGC CTTCGCGACC ATCCTGGCGG TGGTCTCCGG GCTCGCGATC
GCCGGGGCCT CGGCGGCGAG CCACGACCTC TACGCCCGCG TCCTGCGGCG CGGCCGGGCG
AGCGAGGCGG AGGAGGTGCG CGTCTCGAAG GGCGCGGCGG TGGCGATCAG CCTCGCCGCC
ATGGCCCTCG GCCTCGCCTT CGAGAACCAG AACATCGCCT TCCTGGTCGG GCTCGTCTTC
GCCATCGCGG CGAGCGCCAA TTTCCCGGTG ATCGTGCTCT CGGTCTCCTG GCCGGGGCTG
ACCACGCGGG GAGCCGTCGC GGGCTCGCTC GCCGGGCTCC TGTGCGCGCT CGGCCTGATG
ATCCTCGGCC CGGGCGTCTG GACCGCCGTG CTCGGCCTCG GGGCGGCCCC GTTCCCCTAC
GACAACCCCG CGCTCTTCTC CGTGCCGCTC GCCTTCGTGA CCGCGGTGGC GGTCTCGCGC
CTCGACCGCA GCGCGGCCGC CCGCGCCGTC CGCGCGGCCT ACCGCGCCCA GCACGTCACC
GCCCAGACCG GCTTCGACCG GCCCCGGCCG GTCGCCGCCC ACTGA
|
|---|
| Protein sequence | MRPRLLPALV PLALAAGPAA ADALSGPSSR QALNPVAIGL FLAFVAVTLA VTIRAARRGT
RTASDFYAAG GSLGGVQNGL AIAGDYTSAA TFLGVTALVY GSGYDGMIYA VGFLVGFPMI
LFLIAEPLRN LGRYTFADVA AYRLAEIPVR LVAGLNTLVI VLLYLIAQMV GAGKLIELLF
GLPYATAVAL VGVLMMLYVA FGGMRATTWV QIIKAVLLLA GTALMAALIL ARFGFSLEAL
FARAIALHPK SRAIMAPGGL VRDPVSALSL GLALIFGTAG LPHILMRFFT VADAREARLS
VLVATGFITV FYTLLFVLGF GAIALVLGEP AFTDAAGRLI GGPNMVALHL ADRLGGAPLL
GFISAVAFAT ILAVVSGLAI AGASAASHDL YARVLRRGRA SEAEEVRVSK GAAVAISLAA
MALGLAFENQ NIAFLVGLVF AIAASANFPV IVLSVSWPGL TTRGAVAGSL AGLLCALGLM
ILGPGVWTAV LGLGAAPFPY DNPALFSVPL AFVTAVAVSR LDRSAAARAV RAAYRAQHVT
AQTGFDRPRP VAAH
|
|---|
| |