Gene M446_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3754 
Symbol 
ID6129792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4190691 
End bp4191914 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content60% 
IMG OID641643924 
Productmajor facilitator transporter 
Protein accessionYP_001770568 
Protein GI170741913 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.503769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0279175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGCAA CCGCGAGGCA TCCAGCATCG CTTCGCACGC AGGATCCAGG AATGTCGAAG 
CGGCTCATGA CTCTCCTGGC CTGCGCATGC GGCCTGATCG CCGCGAATAT TTATTACGCA
CAGCCCCTTA TTGGCCCAAT CAGTTCTGAA TTGAATTTGC CGAAAGAAGC TGGCGGCCTC
ATCGTTACCT TGACGCAGAT TGGCTATGGT GCCGGGCTGT TGCTCGTGGT GCCTCTTGGT
GATCTTTTCG AGAATCGCCG GCTTGCCATT TCCATCCTGG TCATCGGCGC ATTCGGGCTC
CTCATCTCCG GAATCGCCAG CTCGGCCGCG CCCTTTCTCG CCGCTGCCCT GATGGTGGGT
TTGGGCTCGG TCACGGTGCA GATTCTCGTC CCCTACGCCG CACATCTGTC GCCAGAGGCC
ACGCGTGGCC GCGTGGTCGG TAACGTGATG AGCGGTTTGA TGATGGGCAT CATGCTGGCT
CGACCCTTGG CGAGTCTGAT CACAAACTTT TCGTCCTGGA GGGTCGTCTT TTTCTTTTCG
TGCGCAATCA TGATTGGCCT TACGCTCATA CTCCGCTCTG CGTTGCCTCT CCGGCCAGTC
ACGGCTAAGA TGAGCTATGG CAAAATGCTC GCTTCGATGG CCCATCTCGT CCGGACGACG
CCGGCGTTGC GACGGAGGGC ACTCTATCAC GCCTGCATGT TCGGTGCGTT CAGTCTCTTT
TGGACGATAA CACCGCTTCT GTTGATGGGG CCGGCGTTTG GCTTCAGCCA ACGGGGTATC
GCTCTCTTCG CCTTGGCCGG CGTCGCCGGA GCCGTCGCCG CACCGATCGC CGGCCGGATC
GCGGACCGTG GATGGATCAG ATCTGCAACG GCTGCTGCCA TGATGATGGC GGTCGCCGTC
TTCGCCATGA CGCATATCGC CGTGTTGGGC TCCAACCTAT CGCTCGCGCT CTTCGTGCTG
GCCGGCATCA TCTTGGATTT TGCAGTGTCG GCCAATCTCG TCCTCGGACA ACGTGTGATT
TTTGCGTTGG CGCCCGAGTT TCGTGCGCGG TTGAATGGTG TCTACATGAC AACCTTCTTC
TTCGGTGGCG CGTTTGGTTC CGCTCTAGGG AGCTGGGTGT TTGCCCGCTA CGGGTGGAAC
GGAGCATCTG CTGCCGGCAT CGCCTTTGGG CTGATCGCCT TGGGATATTT CGCAACCGAG
AAGGCGAGCG GATCGCGCGC GTGA
 
Protein sequence
MGATARHPAS LRTQDPGMSK RLMTLLACAC GLIAANIYYA QPLIGPISSE LNLPKEAGGL 
IVTLTQIGYG AGLLLVVPLG DLFENRRLAI SILVIGAFGL LISGIASSAA PFLAAALMVG
LGSVTVQILV PYAAHLSPEA TRGRVVGNVM SGLMMGIMLA RPLASLITNF SSWRVVFFFS
CAIMIGLTLI LRSALPLRPV TAKMSYGKML ASMAHLVRTT PALRRRALYH ACMFGAFSLF
WTITPLLLMG PAFGFSQRGI ALFALAGVAG AVAAPIAGRI ADRGWIRSAT AAAMMMAVAV
FAMTHIAVLG SNLSLALFVL AGIILDFAVS ANLVLGQRVI FALAPEFRAR LNGVYMTTFF
FGGAFGSALG SWVFARYGWN GASAAGIAFG LIALGYFATE KASGSRA