Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_3624 |
Symbol | |
ID | 6134718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 4043319 |
End bp | 4045058 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641643791 |
Product | methanol/ethanol family PQQ-dependent dehydrogenase |
Protein accession | YP_001770439 |
Protein GI | 170741784 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.214303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00920421 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTGTGCGT CGGCGGGGGC GCTCGCGCTG ATGCTCGGCG CCGCCCGGGC CGAGGGCGTG ACGGACCATG ACATCGCCAA CGACGCCAAG ACCCCGGGCG ACGTCGTCAC CTACGGGCTC GGCCTGCAGG GCCAGCGCTA CAGCCCCCTC AAGGCCCTGA CCCGGGACAC GATCAAGGGC CTCGTCCCGG CCTACTCGTT CTCGTTCGGC GGCGAGAAGC AGCGCGGCCA GGAGAGCCAG GCGCTGGTGC ACGACGGCGT GATCTACGTG ACCGGCTCCT ACAGCCGCGC CTTCGCCATC AACGCCCGCA CGGGCGAGAA GATCTGGGAG TACAACGCCC GCCTGCCGGA GGGCATCCTG CCCTGCTGCG ACGTCGTCAA CCGCGGCGGC GCGCTCTACA AGGACCGGTT CTACTTCGGC ACCCTCGACG CCAAGCTGGT GGCGCTCGAC GCCAGGACCG GCAAGGTGAT CTGGCGCAAG GACATCGACG ATTACAAGGC CGGCTACTCC TTCACGGCGG CGCCGATGAT CGTGAAGGGC AAGATCATCA CGGGCGTCTC GGGCGGCGAG TTCGGCGTGG TCGGCCGGGT CGAGGCGCGC GACGCCGAGA CCGGCGAACT CGTCTGGTCG CGGCCGGTGA TCGAGGGCCA CGTCGGCACC CTCCACGGCA AGCCCTCGAC CATGACCGGC AAGGTCAACG AGAGCTGGCC GGGCGACACC TGGAAGTTCG GCGGCGGCGC GACCTGGCTC GGCGGCACCT ACGACGCCGA GACCAACCTG ATCTACTACG GCACCGGCAA TCCCGGCCCG TGGAACAGCG CGACGCGGCC GGGCGACAAC AAGTGGTCGT CGTCGCGGCT GGCGATCAAC CCGGATACCG GCGAGATCGT CTGGGGCTTC CAGACCACCC CGCACGACGG CTGGGACTAC GACGGCGTCA ACGAGTTCAT CCCCTTCGAC CTGCACAAGG ACGGCAAGGT GGTGAAGGCG GGGGCGACCG CCGATCGCAA CGGCTTCTTC TACGTGCTCG ACCGCGCGAA CGGGACGTTC CTGAGCGCGA TGCCGTTCGT GGCGAAGATC AGCTGGGCCA AGGGCATCGA CGGCGACGGG CGGCCGATCT ACGACCCGGC CTTCCGCCCC TCCGACCCGT CGCAGTCGCA GGACGGCAAG AAGGGCAGCA CGGTCTTCGC CGTCCCGAGC TTCCTCGGCG GCAAGAACTG GATGCCGATG GCTTACAGCC CGGACACCAA GCTGTTCTAC GTGCCCTCGA ACGAGTGGGG CATGGACCTG TGGAACGAGC CGGTGGCCTA CAAGAAGGGC GCCGCCTATC TGGGCGCCGG CTTCACCATC AGGCCGGTCT TCGAGGACCA TATCGGCTCG CTCAAGGCGA TCGATCCGGC GACCCAGAAG GTAGTGTGGG AGTACAAGAA CAAGGCGCCG CTGTGGGGCG GCGTGCTGAC CACGGGCGGC GACCTCGTCT TCACCGGCAC GCCGGAGGGC TACCTCAAGG CCTTCGACGC GAAGACCGGC GAGGAGGTCT GGAAGTTCCA GCTCGGCACC GGGGTCGTGT CCTCGCCGAT CACCTGGGAG CAGGACGGCG AGCAGTGGAT CGGCGTCGCG GCGGGCTGGG GCGGCGCGGT GCCGCTCTGG GGCGGCGAGG TGGCGAAGTC CACGGCCGGC ATCACCCAGG GCGCGAGCTT CTGGGCCTTC CGCCTGCCCA AGCAGCTCGC CGCGCGCTGA
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Protein sequence | MCASAGALAL MLGAARAEGV TDHDIANDAK TPGDVVTYGL GLQGQRYSPL KALTRDTIKG LVPAYSFSFG GEKQRGQESQ ALVHDGVIYV TGSYSRAFAI NARTGEKIWE YNARLPEGIL PCCDVVNRGG ALYKDRFYFG TLDAKLVALD ARTGKVIWRK DIDDYKAGYS FTAAPMIVKG KIITGVSGGE FGVVGRVEAR DAETGELVWS RPVIEGHVGT LHGKPSTMTG KVNESWPGDT WKFGGGATWL GGTYDAETNL IYYGTGNPGP WNSATRPGDN KWSSSRLAIN PDTGEIVWGF QTTPHDGWDY DGVNEFIPFD LHKDGKVVKA GATADRNGFF YVLDRANGTF LSAMPFVAKI SWAKGIDGDG RPIYDPAFRP SDPSQSQDGK KGSTVFAVPS FLGGKNWMPM AYSPDTKLFY VPSNEWGMDL WNEPVAYKKG AAYLGAGFTI RPVFEDHIGS LKAIDPATQK VVWEYKNKAP LWGGVLTTGG DLVFTGTPEG YLKAFDAKTG EEVWKFQLGT GVVSSPITWE QDGEQWIGVA AGWGGAVPLW GGEVAKSTAG ITQGASFWAF RLPKQLAAR
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