Gene M446_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3624 
Symbol 
ID6134718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4043319 
End bp4045058 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content69% 
IMG OID641643791 
Productmethanol/ethanol family PQQ-dependent dehydrogenase 
Protein accessionYP_001770439 
Protein GI170741784 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4993] Glucose dehydrogenase 
TIGRFAM ID[TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.214303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00920421 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTGTGCGT CGGCGGGGGC GCTCGCGCTG ATGCTCGGCG CCGCCCGGGC CGAGGGCGTG 
ACGGACCATG ACATCGCCAA CGACGCCAAG ACCCCGGGCG ACGTCGTCAC CTACGGGCTC
GGCCTGCAGG GCCAGCGCTA CAGCCCCCTC AAGGCCCTGA CCCGGGACAC GATCAAGGGC
CTCGTCCCGG CCTACTCGTT CTCGTTCGGC GGCGAGAAGC AGCGCGGCCA GGAGAGCCAG
GCGCTGGTGC ACGACGGCGT GATCTACGTG ACCGGCTCCT ACAGCCGCGC CTTCGCCATC
AACGCCCGCA CGGGCGAGAA GATCTGGGAG TACAACGCCC GCCTGCCGGA GGGCATCCTG
CCCTGCTGCG ACGTCGTCAA CCGCGGCGGC GCGCTCTACA AGGACCGGTT CTACTTCGGC
ACCCTCGACG CCAAGCTGGT GGCGCTCGAC GCCAGGACCG GCAAGGTGAT CTGGCGCAAG
GACATCGACG ATTACAAGGC CGGCTACTCC TTCACGGCGG CGCCGATGAT CGTGAAGGGC
AAGATCATCA CGGGCGTCTC GGGCGGCGAG TTCGGCGTGG TCGGCCGGGT CGAGGCGCGC
GACGCCGAGA CCGGCGAACT CGTCTGGTCG CGGCCGGTGA TCGAGGGCCA CGTCGGCACC
CTCCACGGCA AGCCCTCGAC CATGACCGGC AAGGTCAACG AGAGCTGGCC GGGCGACACC
TGGAAGTTCG GCGGCGGCGC GACCTGGCTC GGCGGCACCT ACGACGCCGA GACCAACCTG
ATCTACTACG GCACCGGCAA TCCCGGCCCG TGGAACAGCG CGACGCGGCC GGGCGACAAC
AAGTGGTCGT CGTCGCGGCT GGCGATCAAC CCGGATACCG GCGAGATCGT CTGGGGCTTC
CAGACCACCC CGCACGACGG CTGGGACTAC GACGGCGTCA ACGAGTTCAT CCCCTTCGAC
CTGCACAAGG ACGGCAAGGT GGTGAAGGCG GGGGCGACCG CCGATCGCAA CGGCTTCTTC
TACGTGCTCG ACCGCGCGAA CGGGACGTTC CTGAGCGCGA TGCCGTTCGT GGCGAAGATC
AGCTGGGCCA AGGGCATCGA CGGCGACGGG CGGCCGATCT ACGACCCGGC CTTCCGCCCC
TCCGACCCGT CGCAGTCGCA GGACGGCAAG AAGGGCAGCA CGGTCTTCGC CGTCCCGAGC
TTCCTCGGCG GCAAGAACTG GATGCCGATG GCTTACAGCC CGGACACCAA GCTGTTCTAC
GTGCCCTCGA ACGAGTGGGG CATGGACCTG TGGAACGAGC CGGTGGCCTA CAAGAAGGGC
GCCGCCTATC TGGGCGCCGG CTTCACCATC AGGCCGGTCT TCGAGGACCA TATCGGCTCG
CTCAAGGCGA TCGATCCGGC GACCCAGAAG GTAGTGTGGG AGTACAAGAA CAAGGCGCCG
CTGTGGGGCG GCGTGCTGAC CACGGGCGGC GACCTCGTCT TCACCGGCAC GCCGGAGGGC
TACCTCAAGG CCTTCGACGC GAAGACCGGC GAGGAGGTCT GGAAGTTCCA GCTCGGCACC
GGGGTCGTGT CCTCGCCGAT CACCTGGGAG CAGGACGGCG AGCAGTGGAT CGGCGTCGCG
GCGGGCTGGG GCGGCGCGGT GCCGCTCTGG GGCGGCGAGG TGGCGAAGTC CACGGCCGGC
ATCACCCAGG GCGCGAGCTT CTGGGCCTTC CGCCTGCCCA AGCAGCTCGC CGCGCGCTGA
 
Protein sequence
MCASAGALAL MLGAARAEGV TDHDIANDAK TPGDVVTYGL GLQGQRYSPL KALTRDTIKG 
LVPAYSFSFG GEKQRGQESQ ALVHDGVIYV TGSYSRAFAI NARTGEKIWE YNARLPEGIL
PCCDVVNRGG ALYKDRFYFG TLDAKLVALD ARTGKVIWRK DIDDYKAGYS FTAAPMIVKG
KIITGVSGGE FGVVGRVEAR DAETGELVWS RPVIEGHVGT LHGKPSTMTG KVNESWPGDT
WKFGGGATWL GGTYDAETNL IYYGTGNPGP WNSATRPGDN KWSSSRLAIN PDTGEIVWGF
QTTPHDGWDY DGVNEFIPFD LHKDGKVVKA GATADRNGFF YVLDRANGTF LSAMPFVAKI
SWAKGIDGDG RPIYDPAFRP SDPSQSQDGK KGSTVFAVPS FLGGKNWMPM AYSPDTKLFY
VPSNEWGMDL WNEPVAYKKG AAYLGAGFTI RPVFEDHIGS LKAIDPATQK VVWEYKNKAP
LWGGVLTTGG DLVFTGTPEG YLKAFDAKTG EEVWKFQLGT GVVSSPITWE QDGEQWIGVA
AGWGGAVPLW GGEVAKSTAG ITQGASFWAF RLPKQLAAR