| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3572 |
|---|
| Symbol | |
|---|
| ID | 6134370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 3988668 |
|---|
| End bp | 3991166 |
|---|
| Gene Length | 2499 bp |
|---|
| Protein Length | 832 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641643739 |
|---|
| Product | putative phosphoketolase |
|---|
| Protein accession | YP_001770387 |
|---|
| Protein GI | 170741732 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3957] Phosphoketolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.928145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.201424 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGAA CGGCGGGAAC GACGCGGGCG ACGGCTTCGG TGCGGGGCAG GGACGGGTCC
GTGCCCGGGC CCCTCGCCCC GCACGACCTC GCCGGCCTCG ACGCCTACTG GAGGGCGGCG
AACTACCTCT CGGTCGGGCA GATCTACCTG ATGGAGAACC CGCTGCTGCG CGAGCCGCTG
ACGCCCGCGC AGGTGAAGCC GCGGCTCCTC GGCCACTGGG GCACCACGCC GGGGCTGAAC
TTCATCTACG CCCACCTGAA CCGGGTGATC CGCGCGCGCG ACCTCGACAT GATCGCGGTC
TGGGGCCCGG GCCACGGCGC GCCGGGGCTG GTGGCCAACG CCTACCTGGA GGGCACCTAC
AGCGAGATCT ACCCGGACGT CGCCCAGGAC GAGGCCGGGA TGGCCCGCCT GTTCCGGCAA
TTCTCCTTCC CGGGCGGGAT CCCGAGCCAC GCCTCGCCGG AGCTGCCCGG CTCGATCCAC
GAGGGCGGCG AGCTCGGCTA CTCCCTCGTC CACGCCTTCG GGGCCGCCCT CGACAATCCC
GACCTGATCG TCGCCTGCGT GGTGGGCGAC GGCGAGGCCG AGACCGGGGC GCTCGCCGCC
TCCTGGCACT CGGCGAAGTT CCTCGACCCG CGCCACGACG GCACCGTCCT GCCGATCCTC
CACCTCAACG GCTACAAGAT CGCCAACCCG ACCATCCTCG CCCGCATGCC CGAGGCGGAG
CTGAGGAGCC TCCTCGTCGG CTACGGCTAC GACCCGATCA TGGTGGCGGG CGACGAGCCC
GCCCCGATGC ACCAGGCCAT GGCGGCGGCC CTCGACGACG CCCTCGACCG CATCGCGCGG
ATCCGGCACG AGGCCGCGGC GGAGCGCCCG CGCTGGCCCA TGATCGTGCT GAGGAGCCCG
AAGGGCTGGA CCGGCCCGGC GCAGGTCGAC GGCAAGCCCG TGGAGGGGAC CTGGCGCGCC
CACCAAGTCC CGGTGGCGGC GATCCGCGAC AACCCCGAGC ACCTCGCGAT CCTCGACGCG
TGGCTGCGCT CCTACGCGCC GGAGACGCTG TTCGACGCGG CCGGGCGCCT GCGGCCCGAC
CTCGCCGCCC TGGCGCCGCG CGGCGAGCGG CGGCTCTCGG CCAACCCGCA GGCCAATGGC
GGGCGCCACC CCAAGCCCCT GCGCCGGCCG CCCCTCGCGC AGCACGCGAT CCCAGTCCCG
GCGCCGGGCG CCACGGAGGC GGAGGCGACG CGGGTGCTCG GCGGCTACTT GCGCGACCTC
CTCTCCCTCA ACGCCGAGGC CCGCAACCTG CGCATCATGG GGCCGGACGA GACCGCCTCG
AACCGCCTCG ACGCGGTGTT CGGGGTGACG GACCGCGCCT GGCAGGAGCG GATCCTGCCC
GGCGACGAGC ATCTCGGCCG CTTCGGGCGG GTGATGGAGG TGCTGAGCGA GCAGCTCTGC
GAGGGCTGGC TCGAAGGCTA CCTGCTCACC GGCCGCCACG GCCTGTTCGC GAGCTACGAG
GCCTTCATCC ACGTCGTCGA CTCGATGGTG AACCAGCACG CCAAGTGGCT GAAATCGGCC
CGGGCGCTGC CCTGGCGGCG GCCGGTGCCG TCGCTCAACC TGCTGCTCTC GTCCCACGTC
TGGCGCCAGG ACCACAACGG ATTCAGCCAC CAGGACCCGG GCTTCATCGA CTTCATCGCC
AACAAGCGGG GCGACACCGC GCGGGTCTAC CTGCCGCCGG ACGCCAACAC CCTGCTGTGG
GTGGCGGATC ACTGTCTGGG CACGCACGAC CGCATCAACG TCATCGTGGC CGGCAAGCAG
CCGGCGCCGC AATGGTTCTC CCCCGAGGCG GCGGCGCGCC ACTGCGAGGC CGGGCTCGGC
GTCCTCGACT TCGCCTCGAC GGAGGGGCAG GGGGAGCCGG ACGTGGTGAT GGCCTGCGCC
GGGGACGTGC CCACGATGGA GACGCTCGCG GCGGTGGACG CGCTCCGCCG CGCGGTGCCC
GACCTCGCCA TCCGCGTCGT CAACGTCGTC GACCTGATGA CCCTGGCCTC GCCCGACGCG
CACGAGCACG GCATCGACGA CGCGGCCTTC GACGGGATCT TCACCCGGGA CCGGCCGGTG
ATCTTCGCCT ATCACGGCTA TCCCTGGCTG ATCCACCGGC TCACCTACAA GCGGACGAAC
CACGCGAACT TCCACGTCCA CGGCTTCATC GAGGAGGGGA CGACGACGAC CCCCTTCGAC
ATGGCGGTGA TGAACCGCCT CGACCGCCAC CACCTCGCCA TCGCGGCCCT GCGCCGCGTC
CCGCGCCTCG GCGCCCGGGC GGGCCGGGTC GAGCGCGCCC TGCGGGAGCG GCTCGCCATC
CACCGCGAGC ACGTCTGCCG GACCGGGGAG GATCTGCCCG AGATCCGCGA CTGGCGCTGG
GGGGAGGGGG AATGGCCGCC GGCCGCCTCC GCGGATCCGT CCCGCGAGGA GGATGCGGAT
CCGCGCGACC TCGAGGCGGG CTGGCAATTC ATGAGCTGA
|
|---|
| Protein sequence | MTGTAGTTRA TASVRGRDGS VPGPLAPHDL AGLDAYWRAA NYLSVGQIYL MENPLLREPL
TPAQVKPRLL GHWGTTPGLN FIYAHLNRVI RARDLDMIAV WGPGHGAPGL VANAYLEGTY
SEIYPDVAQD EAGMARLFRQ FSFPGGIPSH ASPELPGSIH EGGELGYSLV HAFGAALDNP
DLIVACVVGD GEAETGALAA SWHSAKFLDP RHDGTVLPIL HLNGYKIANP TILARMPEAE
LRSLLVGYGY DPIMVAGDEP APMHQAMAAA LDDALDRIAR IRHEAAAERP RWPMIVLRSP
KGWTGPAQVD GKPVEGTWRA HQVPVAAIRD NPEHLAILDA WLRSYAPETL FDAAGRLRPD
LAALAPRGER RLSANPQANG GRHPKPLRRP PLAQHAIPVP APGATEAEAT RVLGGYLRDL
LSLNAEARNL RIMGPDETAS NRLDAVFGVT DRAWQERILP GDEHLGRFGR VMEVLSEQLC
EGWLEGYLLT GRHGLFASYE AFIHVVDSMV NQHAKWLKSA RALPWRRPVP SLNLLLSSHV
WRQDHNGFSH QDPGFIDFIA NKRGDTARVY LPPDANTLLW VADHCLGTHD RINVIVAGKQ
PAPQWFSPEA AARHCEAGLG VLDFASTEGQ GEPDVVMACA GDVPTMETLA AVDALRRAVP
DLAIRVVNVV DLMTLASPDA HEHGIDDAAF DGIFTRDRPV IFAYHGYPWL IHRLTYKRTN
HANFHVHGFI EEGTTTTPFD MAVMNRLDRH HLAIAALRRV PRLGARAGRV ERALRERLAI
HREHVCRTGE DLPEIRDWRW GEGEWPPAAS ADPSREEDAD PRDLEAGWQF MS
|
|---|
| |