Gene M446_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3564 
Symbol 
ID6135522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3981496 
End bp3982188 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID641643731 
Producttwo component transcriptional regulator 
Protein accessionYP_001770379 
Protein GI170741724 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.153344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.125376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA GACTGCTCCT CATCGACGAC GACCGGCGCC TCGCCGCGAT GGTGGCGGAG 
TACCTCTCGG CCGAGGGCTA CGCGGTCGCC TGCCAGCCCA CGGCGCGGGA GGGCCACGAC
GCCCTCCGGC GCGAGCGCTT CGACGCCGTG ATCCTCGACG TGATGCTGCC GGACGGCGAC
GGCTTCGAGC TCTGCCGCCA GATCCGCACC CACTCGCGGG TGCCGATCTT GATGCTGACC
GCCAAGGGCG AGGACACCGA CCGCATCATC GGCCTGGAGA TCGGGGCCGA CGATTACCTG
CCCAAGCCCT TCAACCCGCG CGAGCTGCTC GCGCGCATCC GCGCCCTGCT GCGGCGCCAG
CGCGCCCCGC AGGAGGCCCG GCTCGATTTC GGGCGGCTGC AGATCGATCC CGGATCCCGG
GTCGTGCGGC TCGACGGGGT GGAGCGGCGG CTCACCAGCC ACCAGTTCGA CCTCCTCCTC
GCCTTCGCGA CCCATGCCGG GCGGGTGCTC AGCCGCGAGC GGCTGATGGA CCTCGTCAAG
GGCGAGGATC TCGACGCCTT CGACCGCTCC ATCGACGTGC ACGTCTCGCG CCTGCGGGCG
CTGATCGAGG ACGATCCCCG CCACCCGCGC CGCCTCCTCA CCATCCGGGG CGCCGGCTAC
GTCTTCGCCC GCGAGCAGGA TGCCGAGCGG TGA
 
Protein sequence
MAERLLLIDD DRRLAAMVAE YLSAEGYAVA CQPTAREGHD ALRRERFDAV ILDVMLPDGD 
GFELCRQIRT HSRVPILMLT AKGEDTDRII GLEIGADDYL PKPFNPRELL ARIRALLRRQ
RAPQEARLDF GRLQIDPGSR VVRLDGVERR LTSHQFDLLL AFATHAGRVL SRERLMDLVK
GEDLDAFDRS IDVHVSRLRA LIEDDPRHPR RLLTIRGAGY VFAREQDAER