Gene M446_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3539 
Symbol 
ID6131605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3950839 
End bp3951315 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content73% 
IMG OID641643708 
Productnitrogen fixation protein NifX 
Protein accessionYP_001770356 
Protein GI170741701 
COG category 
COG ID 
TIGRFAM ID[TIGR02663] nitrogen fixation protein NifX 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.89885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00377232 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGCGGCTCG TTGAGAGCGA GGAGCCGGCG GAGCAGGCCG CCGGCCCAGC CTTGCGCGTC 
GCCATCGCCA CCCAGGACCT GAAGAGCCTC AACGCCCATT TCGGCTCGGC GCGGCGCTTC
GCGCTCTACG ACGTGACCGT GCGGGGCTGG AGCTTCGTCG AGGCGGTCAC CTTCGAGGAG
GTCTCCGACG AGGGCGGCCG GCACCGGACC GACGGCGACG ACCGCATCAC CCCGAAGGTC
GAGGCCCTGC GCGGCTGCCA CCTGCTGTTC TGCCTCGCGA TCGGCGGCCC CTCCGCCGCC
AAGGTCGTCA CGGCGAAGAT CCACCCGATC AAGATCGCGC AGGCGCAGCC GATCGAGGCC
GTGCTGGAGC GCACCCGCGC CATGCTGGCG GGCGCGCCCC CGCCCTGGCT GCGCAAGGTG
CTGGCCGCGT CCGGCGCGAC CGCCCCCGAA CCCTCCTTCG CCGACGACGA GGACTGA
 
Protein sequence
MRLVESEEPA EQAAGPALRV AIATQDLKSL NAHFGSARRF ALYDVTVRGW SFVEAVTFEE 
VSDEGGRHRT DGDDRITPKV EALRGCHLLF CLAIGGPSAA KVVTAKIHPI KIAQAQPIEA
VLERTRAMLA GAPPPWLRKV LAASGATAPE PSFADDED