Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_3446 |
Symbol | |
ID | 6129870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 3830333 |
End bp | 3832486 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641643614 |
Product | TonB-dependent heme/hemoglobin receptor family protein |
Protein accession | YP_001770266 |
Protein GI | 170741611 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.494808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00031135 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGATCGTCC GCTGCCTTCC GTCCCGCCGT TCCGGTCTCG CGGCCGGCCT CTCCCTCCTC GCCGTCGCGT CCGCTCAGGC GCGGGATGCG GCGGCGCCCG CCCCGGCGGC CCGGACCGAT GCCCCGATCG CCCTCGACAC GATCTCGGTG ACCTCCACGA GGACCGAGGC GCCGGCCATC GCCGCCCTGT CGGGGACGAG CGTGGTCACC CGCGCGCAGA TCGACCGGAT CCAGCCGAGC CGCCTGTCCG ACCTGCTGCG CGACGTGCCC GGCGTGACGA CGCAGGAGAA CCAGAACGAT CCGGCCCAGG CGGTCAACAT CCGCGGGCTG CAGGATTTCG GGCGGGTCAA CGTGCTGGTG GACGGCGCCC GCCAGGATTT CCAGACCTCC GGGCACAGCG CCAACGGCGT GTTCTACCTC GATCCGGAAC TCGTCGGCGG GGTCGACGTC ACGCGCGGGC CCGCCTCCAC CCTCTACGGC TCCGGCGCGA TCGGCGGCGT GGTCGCGTTC CGCACGCGCG CGATCGACGA CATCCTGACG CCTGACGAGA CGATGGGCGC GGTGCAGAGA TGGGGGTTCG GCGGCAACGG GCAGCGATTC GTGAGCACGA CGGCGCTCGG CGCCCGCATC GGCCCGGCCG CGGACCTGTT CGGCCAGTTC GTCTCGCGCC ACGCCGATCC CTACCGCGAC GGTTCCGGCA CCCTGGTGCG CGACACCGGC AGCGCGCTGA CCGCGGGCCT CCTCAAGGCC AATCTGCGGC CCGCCGAGGG CCACGAGATC AGCGGCACCG CCCTGATCCA GGATTTCGAC TTCGCCAATG CCGGCACCGG CCAGGCGGGG GCCCGCTTCG CCAACAGGGT GCAGGCCGAC ACCTACACCC TCGGCTACCG GTTCGCCCGA CCTGACGTGC CGCTGATCGA CCTCGACGCC AAGGTCTACC GGACCTCGAC GCACGACCTC CTGACCTTCC TCTCCGACGC GCCGAGCGGC CTCTACGGCG GTCTCGGCGC GCGTCCGGGC AATCGCATCG ACTACGACAT CGCGACCTCG GGCCTCGACA TCCACAACTC GGCCCGATTC GACACCTGGG CGCTGAGCCA CCGGCTGACG CTCGGAGGGG ATTCCGTGCT CGACCGCGTC GAGACGGACG ACCGGGCGGG CAGCTTCGGG GCCGCCTTCA CCCCGTCCGG CACCCGCAGG CTCGCGGGAG CGTTCGTCCA GGATGAGGTG GGCTATTCCT CGTGGCTGCG CGTGGTCGGG GCGCTCCGCT ACGACCGCTA CGCATTGTCC GGCGGCGCCG TGCACGCCCG CGGTGAGCGC CTCTCTCCGA GGATCACCGT CGGCGTCACG CCCCTCACCG GAATCACGGT CTTCGGGACC TACGCGGAGG GCTATCGCGC CCCCTCGATC ACCGAGGCCC TGGTGCAGGG CATCCACCCC TTCCCGGCCT TCACCCTCCT GCCCAATCCG GCGCTCCGGC CGGAGGTGGC GCGCACCATC GAGGGCGGCG TCAACCTCGC CTCCGGCGAT CTGCTTCGGC CCGGCGACAC GTTCAGGGCC AAGCTCAGCG TGTTCTCGAC CGGCATCGCC GATTTCATCG CCGTCGGGCC GGTTGGCCCG ACCTATCTCG TGCCGGCGCT TCCCGGCCTG CCGGCCTCGG CCTGCGCGCG CGGCGCGGGG CGGTTTCCGT GCGTGATCCC GGTTCGGTCG CTGCAGTACC GCAACGTCGC CCGCGCGGAC CTCTCCGGCG TCGAGCTGGA GGGCGCCTAC GATTGGGGCG GGGGCTTCGT CTCGCTCGCG GCGACCCACA CCGACGGGCG CGACGCGGCG ACCCGCGAGA CGCTCCTGAC GGTGCCGCCG GACCGGATCA GCGCGACCCT GGGACTGCGC TTCCTCGGCG AGCGCCTCAC GCTCGGGGGC CGCCTCACCG TCGTGGAGGC GCGCCGGGCC GTGCCGGCCG GCGCGACCAT CCTGGCGACG AAGGGCTGCG GCGTCGTCGA CCTCTTCGCC TGCTACCGCT TCGACGATCG CGTCCGGGCC GACGTCATCG TCCAGAACGC GCTCGACAGG CGCTACACGC AATACCTCAA CCTGCTGCAG AGCCCGGGCC TGACCGCCAA AGCCGCGCTC ACCATCGCGT TCGCCACGTG CTGA
|
Protein sequence | MIVRCLPSRR SGLAAGLSLL AVASAQARDA AAPAPAARTD APIALDTISV TSTRTEAPAI AALSGTSVVT RAQIDRIQPS RLSDLLRDVP GVTTQENQND PAQAVNIRGL QDFGRVNVLV DGARQDFQTS GHSANGVFYL DPELVGGVDV TRGPASTLYG SGAIGGVVAF RTRAIDDILT PDETMGAVQR WGFGGNGQRF VSTTALGARI GPAADLFGQF VSRHADPYRD GSGTLVRDTG SALTAGLLKA NLRPAEGHEI SGTALIQDFD FANAGTGQAG ARFANRVQAD TYTLGYRFAR PDVPLIDLDA KVYRTSTHDL LTFLSDAPSG LYGGLGARPG NRIDYDIATS GLDIHNSARF DTWALSHRLT LGGDSVLDRV ETDDRAGSFG AAFTPSGTRR LAGAFVQDEV GYSSWLRVVG ALRYDRYALS GGAVHARGER LSPRITVGVT PLTGITVFGT YAEGYRAPSI TEALVQGIHP FPAFTLLPNP ALRPEVARTI EGGVNLASGD LLRPGDTFRA KLSVFSTGIA DFIAVGPVGP TYLVPALPGL PASACARGAG RFPCVIPVRS LQYRNVARAD LSGVELEGAY DWGGGFVSLA ATHTDGRDAA TRETLLTVPP DRISATLGLR FLGERLTLGG RLTVVEARRA VPAGATILAT KGCGVVDLFA CYRFDDRVRA DVIVQNALDR RYTQYLNLLQ SPGLTAKAAL TIAFATC
|
| |