Gene M446_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3389 
Symbol 
ID6135311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3763512 
End bp3763949 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content70% 
IMG OID641643561 
Productprotein TolR 
Protein accessionYP_001770213 
Protein GI170741558 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.436196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.250194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG GAGCCGCACA GGGCGGCAAG CGCCGCCGGC GCGGGCGGCG GGGCGGCGCC 
ATCAACGAGA TCAACATGAC GCCGTTCATC GACGTCGTGC TGGTGCTGCT CATCATCTTC
ATGGTGGCAG CGCCGATGAT GACGGTGGGC GTGCCCCTCG ATCTGCCGCA GACCAAGGCC
GCGCCGCTCA ACTCGGACGC CAAGCCGGTC ACCCTCTCGA TCCGGCAGAC CGGCCAGGTC
TTCCTCGGCG AGGAGGAACT CGCCGACGAC GCCATCGTGC CCCGCCTCAG CGCCACGGCG
CGGGAGGGGT TCGAGGAGCG CGTCTTCGTG CGCGGCGACA AGCGGGTCGA TTACGGCCGG
GTCGCGCAGG TGATGGCGAT CGTGACGGGC GGCGGCTTCA AGAAGGTCGC CCTCGTCACC
GAGCCCGACC AGCGATAG
 
Protein sequence
MATGAAQGGK RRRRGRRGGA INEINMTPFI DVVLVLLIIF MVAAPMMTVG VPLDLPQTKA 
APLNSDAKPV TLSIRQTGQV FLGEEELADD AIVPRLSATA REGFEERVFV RGDKRVDYGR
VAQVMAIVTG GGFKKVALVT EPDQR