Gene M446_3281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3281 
Symbol 
ID6131552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3636228 
End bp3638429 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content71% 
IMG OID641643468 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001770120 
Protein GI170741465 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.740895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.511362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCA CGCATTTCCG CTTCGAGACC GATCAAGACG GCATCGCGCT CGCGACCTGG 
GACAGCCCCG GCCGCTCCAT GAACGTGATC ACCCCCGAGG TGATGGCCGA ACTCGACCGG
ATCATCGACG CGGTCGCGGG CGACGCCGCC GTCAAGGGCT GCGTCATCAC CTCGGGCAAG
GAGGCCTTCT CGGGCGGGGC CGACCTCACG ATGCTGCAGG GGCTGGGCGC CGAATACGCC
CGGCTCAGCC GGGAGCGCGG CGAGGAGGAG GCGATGCGCT TCTTCTTCGA GGAGACCCGC
CGCCTCTCGC TGCTCTACCG GAAGCTCGAG ACCTGCGGGA AGCCCTTCGC GGCGGCGATC
CACGGCACCT GCCTGGGCGG CGCCTTCGAG CTCGCGCTCG CCTGCCATCA CCGCGTCGTC
TCGGACGACG ACAAGACCCG GGTCGGCCTG CCGGAGATCA AGGTCGGGCT GTTCCCCGGG
GCCGGCGGCA CTCAGCGCGT CGCCCGCCTG ATGCAGACCG GCGACGCCCT GCAGATGCTG
TTCAAGGGCG ACCAGATCCG GCCGCTCATG GCCCGCAACA TGGGCCTCGT CCACGCGGTG
GCCAAGCGCG ATTCCGTCGT CGCGGAGGCC AAGGCCTGGA TCCGGGGCGG CGGCGCGGCG
CTCGCCCCCT GGGACCAGCC GAAGTTCAAG GCCCCCTCCG GCAAGGTCTA CTCGCCGGCC
GGGATGATGA CCTGGCCGCC CGCCAACGCC ATCTACCGCC GCGAGACCCA CGACAATTAC
CCGGCCGCGA AGGCGATCCT GCAATCGGTC TACGAGGGCC TGCAGCTGCC GATGGACCTC
GCGCTCAAGG TCGAGAGCCG CTACTTCGCC AAGATCCTGC GCTCGCCGGA AGCCGCGGCG
ATGATCCGCT CGCTCTTCGT CTCGATGGGC GAGCTCAACA AGGGCGCCCG GCGCCCGGCC
GCGATCGGCC CGGTCAGCCT CAAGCGGGTC GGGGTCGTCG GCGCGGGCTT CATGGGCGCG
GGCATCGCCT ACGTGACGGC GCAGGCCGGG ATCGAGGTCG TGCTGATCGA CCAGAGCGCG
GAGGCGGCCG AGAAGGGCAA GGCCTACTCG CACAAGCTCG TCTCCGACCA GATCATGAAG
GGCCGCGCCA AGACCGCCGA CCGCGACGCG CTGCTCGCCC GCATCACCGC CACCGCCGAC
TACGCCGCCC TGTCCGACTG CGACCTCGTG ATCGAGGCGG TGTTCGAGGA CCCGAAGGTC
AAGGCCGAGG TCATCGCCAA GGTCGAGGCG TCGATCCGCC CCGAGACGAT CTTCGCCTCC
AACACCTCGA CGCTGCCGAT CAGCGGCCTC GCCGACGGCT CCGCCCGGCC CGACCAGTTC
ATCGGCATCC ACTTCTTCTC GCCGGTCGAG AAGATGCTGC TGGTCGAGAT CATCAAGGGG
CGGCAGAGCG GCGAGCGGGC GCTCGCCGCC GCCCTCGACT ACGTGCGGGC GATCCGCAAG
ACGCCGATCG TGGTCAACGA CGCGCGCGGC TTCTTCGCCA ACCGCTGCGT GGGCGCCTAC
ATCCTCGAAG GCCACCTGAT GCTCGCCGAG GGGGTGCCGG CCGCCATGAT CGAGAATGCC
GGGCGGCAGG CCGGCATGCC GGTCGGTCCC CTCTCCCTCA ATGACGAGGT CGGCGTCGAT
CTCGGCCTCA AGATCCTGAA GGCCACCAAG GCCCAGGCCG GCGAGGGCGC CGTGAACCCG
CTCCAGGAGC GCCTGCTCGT CGCCCTCGTC GAGGGCGAGG GACGGCTCGG GCGCAAGAAC
CGCAAGGGCT TCTACGATTA CCCGGAGAAC GGGCCGAAGC GGCTCTGGCC GGGCCTCGCG
GCGCTCGCCG GGACGCGCCA GGATCCCGAC GCGGTCGACT TCCAGGAACT GAAGCACCGG
CTCCTCGTCG CCCAGGCGGT CGAGGCGGCC CGGGTCTACG GCGAGGGCGT GGTGACGGAT
CCCCGCGAGG CGGATGTCGG CTCGATCCTC GGCTTCGGCT TCGCGCCCTT CACGGGCGGG
GTGCTCTCCT ACATCGACGG CATGGGCGCC CGCCGCTTCG TGGAGCTGTG CCGCCGCCTC
GAGGCCAAGC ACGGCGCCCG CTTCGCGCCC CCGGCGAACC TGCTCGCCAT GGCGGAGACG
GGCGAGCGCT TCTACGGCCG CGCGGAGGCC CGGGCGGCCT GA
 
Protein sequence
MDLTHFRFET DQDGIALATW DSPGRSMNVI TPEVMAELDR IIDAVAGDAA VKGCVITSGK 
EAFSGGADLT MLQGLGAEYA RLSRERGEEE AMRFFFEETR RLSLLYRKLE TCGKPFAAAI
HGTCLGGAFE LALACHHRVV SDDDKTRVGL PEIKVGLFPG AGGTQRVARL MQTGDALQML
FKGDQIRPLM ARNMGLVHAV AKRDSVVAEA KAWIRGGGAA LAPWDQPKFK APSGKVYSPA
GMMTWPPANA IYRRETHDNY PAAKAILQSV YEGLQLPMDL ALKVESRYFA KILRSPEAAA
MIRSLFVSMG ELNKGARRPA AIGPVSLKRV GVVGAGFMGA GIAYVTAQAG IEVVLIDQSA
EAAEKGKAYS HKLVSDQIMK GRAKTADRDA LLARITATAD YAALSDCDLV IEAVFEDPKV
KAEVIAKVEA SIRPETIFAS NTSTLPISGL ADGSARPDQF IGIHFFSPVE KMLLVEIIKG
RQSGERALAA ALDYVRAIRK TPIVVNDARG FFANRCVGAY ILEGHLMLAE GVPAAMIENA
GRQAGMPVGP LSLNDEVGVD LGLKILKATK AQAGEGAVNP LQERLLVALV EGEGRLGRKN
RKGFYDYPEN GPKRLWPGLA ALAGTRQDPD AVDFQELKHR LLVAQAVEAA RVYGEGVVTD
PREADVGSIL GFGFAPFTGG VLSYIDGMGA RRFVELCRRL EAKHGARFAP PANLLAMAET
GERFYGRAEA RAA