| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3263 |
|---|
| Symbol | |
|---|
| ID | 6132126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3612356 |
|---|
| End bp | 3613492 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641643450 |
|---|
| Product | mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_001770102 |
|---|
| Protein GI | 170741447 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.109153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACG GGACCGACAC GATCCGCCGG ATCAGGCTGC ACGCGGTGAC CCTGCCGCTC
GCCAGCCCGA TCAGCGACGC CAAGGTGCTC ACCGGGCGCC AGAGGCCGAT GACCGAGATC
GCCATCCTGG TCTGCGAGAT CGAGGCCGGG GACGGGTCGG GCGGCCTCGG CTTCAGCTAC
GTGAAGCGGG CCGGCGGCCC GGGGCAGTTC GCCCATGCCC GCGAGATCGC GCCCGCCCTG
CTCGGGGAGG ATCCGAGCGA CATCGCCAAG GCCTGGGACC GCCTGGCCTG GGCGGGAGCC
TCGGCCGGCC GCGGCGGCCT CGCGGTCCAG GCGATCGGCG CCTTCGACGT CGCCCTCTGG
GACCTGAAGG CGAGGCGGGC CGGCCTCTCG CTCGCCAAGC TCCTCGGGGC GCACCGCGAT
TCGGTGCGCT GCTACAACAC GTCGGGCGGC TTCCTGCACA CGCCCCTCGA CGAGCTGCTG
GTCAATGCCG AGCGCTCCCG CGCCCGCGGG ATCGGCGGCA TCAAGCTCAA GGTTGGGCAG
CCGGACGGGG CCCTCGACGT GAAGCGGGTC GCCGCCGTGC GGGAGCGCCT CGGCGACGAG
GTCCCGCTGA TGGTCGATGC CAACCAGCAA TGGGATCGGC CGACCGCCCT GCGCATGGGC
CGGATCTTCG AGGCCTTCAA CCTCGTCTGG ATCGAGGAGC CCCTCGACTG CCTGGACGCG
GCCGGCCACG CGGCGCTCGC CGCCGCCCTC GACACGCCGA TCGCCACCGG CGAGATGCTG
ACGAGCGTCG CCGAGCACTG GGACTTCATC CGCCAGAACG GCGCCGACTA CCTGATGCCG
GACGCGCCGC GGGTCGGCGG CATCACGCCC TTCCTCAAGG TGGCGGCGCT GGCGGAATTC
GCCGGCCTCA CCGTCGCGCC GCACTTCGCC ATGGAGTTGC ACATCCACCT CGCCGCCGCG
CTCCAGCGCG AGCCCTGGGT GGAGCATTTC GAGTGGCTCG AACCGCTCTT CAACGAGCGG
CTGGCCCTCG AGGGCGGCCG GATGATCGTG CCGACCCGGC CCGGGCTCGG CCTCACCCTG
AGCGATCAGG CCCGCGCCTG GACCCGCGAG ACCGCGGAAT TCGTCGCGCC GGCCTGA
|
|---|
| Protein sequence | MPHGTDTIRR IRLHAVTLPL ASPISDAKVL TGRQRPMTEI AILVCEIEAG DGSGGLGFSY
VKRAGGPGQF AHAREIAPAL LGEDPSDIAK AWDRLAWAGA SAGRGGLAVQ AIGAFDVALW
DLKARRAGLS LAKLLGAHRD SVRCYNTSGG FLHTPLDELL VNAERSRARG IGGIKLKVGQ
PDGALDVKRV AAVRERLGDE VPLMVDANQQ WDRPTALRMG RIFEAFNLVW IEEPLDCLDA
AGHAALAAAL DTPIATGEML TSVAEHWDFI RQNGADYLMP DAPRVGGITP FLKVAALAEF
AGLTVAPHFA MELHIHLAAA LQREPWVEHF EWLEPLFNER LALEGGRMIV PTRPGLGLTL
SDQARAWTRE TAEFVAPA
|
|---|
| |