| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3230 |
|---|
| Symbol | |
|---|
| ID | 6132688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 3575471 |
|---|
| End bp | 3576529 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641643418 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_001770070 |
|---|
| Protein GI | 170741415 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000670188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.378234 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTGGG ACGGCCTGGG TCTCTTTTCG GCAGGGCCGA CCCGTCGCCT CGCGGATGCG
GGCGGCGGGG GCGGGGGCGC GAGCCTCTCG GACGAGCCGC CCCGGCCCGG GCCCCGCCCC
CGCCGCCCCA AGCTCGGCCT CGCCCTCGGA GGCGGCGCCG CCCGGGGCTG GTCGCATATC
GGCGTGATCG AAGCTCTGGA GGAAGCGGGA TTCGGGATCG ACGTGGTGGC GGGCTGCTCG
ATCGGCGCCG CCGTCGGGGC CTGCTACGCG GGCGGCAAGC TCGCCGCCCT CAAGGAGTTC
GCCCTCTCGC TGACGAAGCG CCGGGTGATG GGCCTGCTCG ACTTCCACCT GAGCGGCTCC
GGCCTCATCG CGGGCGAGCG GCTGCGCCAG TTGCTGGAGC GCGACCTCGG CGGGCAATGC
ATCGAGGCCC TGCCCGTCAC CTTCGCGACC GTCGCGACCG AACTCGGCAG CGGCCACGAG
ATCTGGCTCA CCCGCGGCGG CGTCGTCGAG GCGGTGCGCG CCTCCTACGC GCTCCCGGGC
ATCTTCGACC CGGTCAAGGT CGGCGGCCGC TGGCTGATGG ACGGGGCGCT CGTGAACCCG
GTGCCGGTGA CGGTGGCCCG CGCCCTGGGC GCGGACGTCG TCCTGTGCGT GAACCTCAAC
GGCGACATCC GCATCCGCGG GACCGTGATC CAGGCGCATG GCGGCGACGC GAGCGTGGTC
GAGGCGGCCG CGAACGAGGC TGTGGAGACC CTGACCGAGG CGCCGCGCCG CTGGCCGCGG
CTGCGCGCCC AGCGCGCGCC CAAGCCCCGG CTCGACCCCG GCATGCCGGG GGGCATCGCC
AGCGTGATGG TGGACGCCTT CAACATCACG CAGGACCGGA TTTCGCGCTC GCGCCTCGCG
GGCGACCCGC CCGACGTGAT GATCAACCCG AAGCTCGCCC AGATGGGCCT GTTCGAGTTC
CACCGGGCCG AGGAGTGCAT CGAGCTCGGG CGTCAGGCCG CCCGCAAGAT GCTCCCGGAG
ATCCGCGAAG TCGTGGCCGC CGCGGCCCTT CCGGGCTGA
|
|---|
| Protein sequence | MMWDGLGLFS AGPTRRLADA GGGGGGASLS DEPPRPGPRP RRPKLGLALG GGAARGWSHI
GVIEALEEAG FGIDVVAGCS IGAAVGACYA GGKLAALKEF ALSLTKRRVM GLLDFHLSGS
GLIAGERLRQ LLERDLGGQC IEALPVTFAT VATELGSGHE IWLTRGGVVE AVRASYALPG
IFDPVKVGGR WLMDGALVNP VPVTVARALG ADVVLCVNLN GDIRIRGTVI QAHGGDASVV
EAAANEAVET LTEAPRRWPR LRAQRAPKPR LDPGMPGGIA SVMVDAFNIT QDRISRSRLA
GDPPDVMINP KLAQMGLFEF HRAEECIELG RQAARKMLPE IREVVAAAAL PG
|
|---|
| |