| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3175 |
|---|
| Symbol | |
|---|
| ID | 6131556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 3513752 |
|---|
| End bp | 3514510 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641643363 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001770015 |
|---|
| Protein GI | 170741360 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.49109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0150297 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGTG CGGACCTGAG GGGGAAATCC GTCCTGGTGA CCGGGGCAGC GTCGGGGATC
GGGCTCGCGG CCGCGACCCT GTTCGCGCGC TGCGGCGCGG CGGTCGCCCT CAATCACCTG
GCCGAGGACG GGCGCGGGCC GGAGGCCGCC GCGCGCCTCG CGGCGGAGGG CTACCGCGTC
ACGGCCGTCG CCGGCAGCGT CGCGCAGGCG GGCGAGGCGG AGGCGCTGGT CGGCCGGGCG
GTCGAGGCGC TCGGCGGCCT CGACGTCCTG ATCAACAATG CCGGCACCTC CGGCACCGCC
CAGCCGATTC CCTTCGCCGA TCTCGACGCG ATGACGGAGG AGTTCTGGCA GACGATCCTC
TCGACCAACC TGATCGGCCC GTACCGCTGC GCGCGCGCCG CGGCGCCCGC CCTCCGGGCC
CGGCGCGGCG CCATCGTCAA CACGGCCTCG GTGGCCGGCC TCGGCCGGCG CGGCTCCAGC
ATCGCCTACT CGGCCAGCAA GGCGGGGCTC GTGAACCTCA CCCGCAGCCT CGCCCGGGCG
CTCGCCCCCG AGGTGCGGGT CAACGCGGTC GCGCCGGGCC TGGTCGAGAC GCCCTGGACC
GAGGCCTGGC CGGCCGAGCG CAAGCAGGCG ACCCTGTCGC GCACCCTGCT GGCGCGGCTC
GCCAAGCCCG AGGACATCGC CGAGGCGATG CTCTTCCTGG CCGCGGGCGC GGCCTACGTG
ACCGGCGAGA CCCTGGTGGT CGACGGCGGC AGCGACTGA
|
|---|
| Protein sequence | MISADLRGKS VLVTGAASGI GLAAATLFAR CGAAVALNHL AEDGRGPEAA ARLAAEGYRV
TAVAGSVAQA GEAEALVGRA VEALGGLDVL INNAGTSGTA QPIPFADLDA MTEEFWQTIL
STNLIGPYRC ARAAAPALRA RRGAIVNTAS VAGLGRRGSS IAYSASKAGL VNLTRSLARA
LAPEVRVNAV APGLVETPWT EAWPAERKQA TLSRTLLARL AKPEDIAEAM LFLAAGAAYV
TGETLVVDGG SD
|
|---|
| |