Gene M446_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3104 
SymbolglyA 
ID6130248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3434661 
End bp3435962 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content69% 
IMG OID641643295 
Productserine hydroxymethyltransferase 
Protein accessionYP_001769948 
Protein GI170741293 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.425727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00549191 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGCGG GCACCGCCAA GACTCCCCTG TCGAATTCGT TCTTCTCGGC TTCCCTCGCT 
GACGTCGATC CGGAACTGTC CCGCGCGGTG CAACAGGAGC TCGGCCGGCA GCAGCACGAG
ATCGAGCTGA TCGCCTCCGA GAACATCGTG TCGCGGGCGG TGCTGGAGGC GCAGGGCTCG
GTGCTCACCA ACAAGTACGC GGAGGGCTAT CCGGGCCGCC GCTACTACGG CGGCTGCGAG
TTCGTCGACA TTGCCGAGAA CCTCGCCATC GAGCGCGCCA AGCGCCTGTT CGGCTGCGAC
TTCGCCAACG TGCAGCCGAA TTCCGGCAGC CAGGCGAACC AGGCCGTGTT CATGGCCACG
ATGCAGCCGG GCGACACCTT CCTGGGCCTC GACCTCGCGG CGGGCGGCCA CCTCACCCAC
GGTGCGCCCC CGAACGTCTC GGGCAAGTGG TTCAAGCCGG TCTCCTACAC GGTGCGCCGC
GAGGACCAGC GCATCGACAT GGAGCAGGTC GCCAAGCTCG CCGAGGAGCA CAAGCCCAAG
GTGATCATCG CGGGCGGCTC GGGCTATCCC CGCCACTGGG ACTTCGCCAA GTTCCGCGAG
ATCGCCGACA GCGTCGGCGC CGTGTTCTTC GTCGACATGG CCCATTTCGC CGGTCTCGTG
GCGGGCGGCG TGCATCCCTC GCCGTTCCCG CACGCCCACG TCGTCACCAC GACCACGCAC
AAGACGCTGC GCGGCCCGCG CGGCGGCATG GTCCTGACGA ACGACGAGGC TCTGGCCAAG
AAGATCAACT CGGCCGTGTT CCCGGGCCTC CAGGGCGGCC CGCTGATGCA CGTCATCGCC
GGCAAGGCGG TGGCCTTCGG CGAGGCGCTC TCGCCCGACT TCAAGATCTA CGCCAAGCAG
GTGGTGGAGA ACGCCAAGGC GCTGGCCGAC ACGATCATCT CGGGCGGCTT CGACATCACC
ACCGGCGGCA CCGACAACCA CCTGATGCTG GTGGACATGC GGCCCAAGAA CCTGACCGGC
AAGGCGGCCG AGGCGGCCCT CTCGCGCGCC GGCATCACCT GCAACAAGAA CGGCGTGCCG
TTCGACCCGC AGAAGCCGAC CGTGACCTCG GGCATCCGCC TCGGCACCCC GGCCGCCACC
TCCCGCGGCT TCGGCGTCGC CGAGTTCAAG AAGGTGGGCG AGCTCATCGT GACGGTGCTC
GACGGCCTCG CCCGGGCGGG CGAGGCGGGC GACGGCGCGG CCGAGAAGAA GGTGCTGGAG
GAGGTCCACG CCCTCACGGA CCGCTTCCCC ATCTACGCCT GA
 
Protein sequence
MSAGTAKTPL SNSFFSASLA DVDPELSRAV QQELGRQQHE IELIASENIV SRAVLEAQGS 
VLTNKYAEGY PGRRYYGGCE FVDIAENLAI ERAKRLFGCD FANVQPNSGS QANQAVFMAT
MQPGDTFLGL DLAAGGHLTH GAPPNVSGKW FKPVSYTVRR EDQRIDMEQV AKLAEEHKPK
VIIAGGSGYP RHWDFAKFRE IADSVGAVFF VDMAHFAGLV AGGVHPSPFP HAHVVTTTTH
KTLRGPRGGM VLTNDEALAK KINSAVFPGL QGGPLMHVIA GKAVAFGEAL SPDFKIYAKQ
VVENAKALAD TIISGGFDIT TGGTDNHLML VDMRPKNLTG KAAEAALSRA GITCNKNGVP
FDPQKPTVTS GIRLGTPAAT SRGFGVAEFK KVGELIVTVL DGLARAGEAG DGAAEKKVLE
EVHALTDRFP IYA